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    RUNX1T1 RUNX1 translocation partner 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 487044, updated on 26-Sep-2018

    Summary

    Gene symbol
    RUNX1T1
    Gene description
    RUNX1 translocation partner 1
    See related
    Ensembl:ENSCAFG00000009078
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See RUNX1T1 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 29 NC_006611.3 (37156861..37289934, complement)

    Chromosome 29 - NC_006611.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111093214 Neighboring gene uncharacterized LOC111093156 Neighboring gene uncharacterized LOC111093230 Neighboring gene uncharacterized LOC111093224 Neighboring gene uncharacterized LOC111093186

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006611.3 Chromosome 29 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    protein CBFA2T1; LOW QUALITY PROTEIN: protein CBFA2T1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006611.3 Reference CanFam3.1 Primary Assembly

      Range
      37156861..37289934 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_544173.6XP_544173.3  LOW QUALITY PROTEIN: protein CBFA2T1

      Related
      ENSCAFP00000013371.3, ENSCAFT00000014458.3
      Conserved Domains (5) summary
      TIGR02794
      Location:462562
      tolA_full; TolA protein
      pfam01753
      Location:574610
      zf-MYND; MYND finger
      pfam07531
      Location:181267
      TAFH; NHR1 homology to TAF
      pfam08788
      Location:396462
      NHR2; NHR2 domain like
      cl25642
      Location:526663
      DUF390; Protein of unknown function (DUF390)
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