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    PTPRO protein tyrosine phosphatase receptor type O [ Canis lupus familiaris (dog) ]

    Gene ID: 486664, updated on 12-Apr-2019

    Summary

    Official Symbol
    PTPROprovided by VGNC
    Official Full Name
    protein tyrosine phosphatase receptor type Oprovided by VGNC
    Primary source
    VGNC:VGNC:45195
    See related
    Ensembl:ENSCAFG00000012789
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See PTPRO in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 27 NC_006609.3 (31082334..31322024, complement)

    Chromosome 27 - NC_006609.3Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S3a-like Neighboring gene epidermal growth factor receptor pathway substrate 8 Neighboring gene uncharacterized LOC102153146 Neighboring gene uncharacterized LOC111092826 Neighboring gene RAS like estrogen regulated growth inhibitor

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006609.3 Chromosome 27 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    General protein information

    Preferred Names
    receptor-type tyrosine-protein phosphatase O
    XP_005637166.2
    XP_013964182.2
    XP_543791.4

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006609.3 Reference CanFam3.1 Primary Assembly

      Range
      31082334..31322024 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014108707.2XP_013964182.2  receptor-type tyrosine-protein phosphatase O isoform X2

      Conserved Domains (4) summary
      smart00194
      Location:11431398
      PTPc; Protein tyrosine phosphatase, catalytic domain
      cd00063
      Location:764864
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:669755
      fn3; Fibronectin type III domain
      cl28033
      Location:22247
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    2. XM_005637109.3XP_005637166.2  receptor-type tyrosine-protein phosphatase O isoform X1

      Related
      ENSCAFP00000018900.3, ENSCAFT00000020369.3
      Conserved Domains (4) summary
      smart00194
      Location:11711426
      PTPc; Protein tyrosine phosphatase, catalytic domain
      cd00063
      Location:764864
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:669755
      fn3; Fibronectin type III domain
      cl28033
      Location:22247
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    3. XM_543791.6XP_543791.4  receptor-type tyrosine-protein phosphatase O isoform X1

      Conserved Domains (4) summary
      smart00194
      Location:11711426
      PTPc; Protein tyrosine phosphatase, catalytic domain
      cd00063
      Location:764864
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:669755
      fn3; Fibronectin type III domain
      cl28033
      Location:22247
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
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