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    ATF1 activating transcription factor 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 486545, updated on 26-Sep-2018

    Summary

    Official Symbol
    ATF1provided by VGNC
    Official Full Name
    activating transcription factor 1provided by VGNC
    Primary source
    VGNC:VGNC:38207
    See related
    Ensembl:ENSCAFG00000007928
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See ATF1 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 27 NC_006609.3 (3904635..3993387, complement)

    Chromosome 27 - NC_006609.3Genomic Context describing neighboring genes Neighboring gene methyltransferase like 7A Neighboring gene transmembrane serine protease 12 Neighboring gene uncharacterized LOC111092853 Neighboring gene uncharacterized LOC111092854 Neighboring gene disco interacting protein 2 homolog B Neighboring gene 60S acidic ribosomal protein P1 pseudogene

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006609.3 Chromosome 27 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    cyclic AMP-dependent transcription factor ATF-1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006609.3 Reference CanFam3.1 Primary Assembly

      Range
      3904635..3993387 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022411367.1XP_022267075.1  cyclic AMP-dependent transcription factor ATF-1 isoform X1

      Conserved Domains (1) summary
      pfam02173
      Location:88122
      pKID; pKID domain
    2. XM_022411374.1XP_022267082.1  cyclic AMP-dependent transcription factor ATF-1 isoform X3

      Conserved Domains (1) summary
      pfam02173
      Location:4882
      pKID; pKID domain
    3. XM_022411369.1XP_022267077.1  cyclic AMP-dependent transcription factor ATF-1 isoform X1

      Conserved Domains (1) summary
      pfam02173
      Location:88122
      pKID; pKID domain
    4. XM_022411375.1XP_022267083.1  cyclic AMP-dependent transcription factor ATF-1 isoform X3

      Conserved Domains (1) summary
      pfam02173
      Location:4882
      pKID; pKID domain
    5. XM_022411372.1XP_022267080.1  cyclic AMP-dependent transcription factor ATF-1 isoform X3

      Conserved Domains (1) summary
      pfam02173
      Location:4882
      pKID; pKID domain
    6. XM_022411365.1XP_022267073.1  cyclic AMP-dependent transcription factor ATF-1 isoform X1

      Conserved Domains (1) summary
      pfam02173
      Location:88122
      pKID; pKID domain
    7. XM_022411366.1XP_022267074.1  cyclic AMP-dependent transcription factor ATF-1 isoform X1

      Conserved Domains (1) summary
      pfam02173
      Location:88122
      pKID; pKID domain
    8. XM_022411373.1XP_022267081.1  cyclic AMP-dependent transcription factor ATF-1 isoform X3

      Conserved Domains (1) summary
      pfam02173
      Location:4882
      pKID; pKID domain
    9. XM_022411370.1XP_022267078.1  cyclic AMP-dependent transcription factor ATF-1 isoform X2

      Conserved Domains (1) summary
      pfam02173
      Location:5791
      pKID; pKID domain
    10. XM_022411371.1XP_022267079.1  cyclic AMP-dependent transcription factor ATF-1 isoform X2

      Conserved Domains (1) summary
      pfam02173
      Location:5791
      pKID; pKID domain
    11. XM_014108653.2XP_013964128.1  cyclic AMP-dependent transcription factor ATF-1 isoform X4

      Conserved Domains (2) summary
      cd14690
      Location:254308
      bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
      pfam02173
      Location:88122
      pKID; pKID domain
    12. XM_543671.6XP_543671.2  cyclic AMP-dependent transcription factor ATF-1 isoform X5

      UniProtKB/TrEMBL
      F1Q2N2
      Related
      ENSCAFP00000011736.3, ENSCAFT00000012672.3
      Conserved Domains (2) summary
      cd14690
      Location:214268
      bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
      pfam02173
      Location:4882
      pKID; pKID domain

    RNA

    1. XR_002620265.1 RNA Sequence

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