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    SPON1 spondin 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 476864, updated on 26-Sep-2018

    Summary

    Official Symbol
    SPON1provided by VGNC
    Official Full Name
    spondin 1provided by VGNC
    Primary source
    VGNC:VGNC:46752
    See related
    Ensembl:ENSCAFG00000008341
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See SPON1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 21 NC_006603.3 (36778435..37030042)

    Chromosome 21 - NC_006603.3Genomic Context describing neighboring genes Neighboring gene fatty acyl-CoA reductase 1 Neighboring gene uncharacterized LOC111091563 Neighboring gene uncharacterized LOC111091564 Neighboring gene uncharacterized LOC106560193 Neighboring gene RAS related 2 Neighboring gene coatomer protein complex subunit beta 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006603.3 Chromosome 21 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006603.3 Reference CanFam3.1 Primary Assembly

      Range
      36778435..37030042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005633691.2XP_005633748.1  spondin-1

      See identical proteins and their annotated locations for XP_005633748.1

      UniProtKB/TrEMBL
      F6XC28
      Related
      ENSCAFP00000012337.3, ENSCAFT00000013333.3
      Conserved Domains (3) summary
      cd08544
      Location:43182
      Reeler; Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins
      pfam00090
      Location:562610
      TSP_1; Thrombospondin type 1 domain
      pfam06468
      Location:205392
      Spond_N; Spondin_N
    2. XM_534067.5XP_534067.2  spondin-1

      See identical proteins and their annotated locations for XP_534067.2

      UniProtKB/TrEMBL
      F6XC28
      Conserved Domains (3) summary
      cd08544
      Location:43182
      Reeler; Reeler, the N-terminal domain of reelin, F-spondin, and a variety of other proteins
      pfam00090
      Location:562610
      TSP_1; Thrombospondin type 1 domain
      pfam06468
      Location:205392
      Spond_N; Spondin_N
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