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    APBA1 amyloid beta precursor protein binding family A member 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 472947, updated on 20-Apr-2019

    Summary

    Official Symbol
    APBA1provided by VGNC
    Official Full Name
    amyloid beta precursor protein binding family A member 1provided by VGNC
    Primary source
    VGNC:VGNC:8800
    Locus tag
    CK820_G0017731
    See related
    Ensembl:ENSPTRG00000021007
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See APBA1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 9 NC_036888.1 (56877566..57116583)
    104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 9 NC_006476.4 (46590381..46833430, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 9 NC_006476.3 (67974559..68214983, complement)

    Chromosome 9 - NC_036888.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107976672 Neighboring gene uncharacterized LOC107976671 Neighboring gene protein prenyltransferase alpha subunit repeat containing 1 Neighboring gene uncharacterized protein Rv2082-like Neighboring gene family with sequence similarity 189 member A2 Neighboring gene uncharacterized LOC104007881

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    amyloid beta A4 precursor protein-binding family A member 1; amyloid-beta A4 precursor protein-binding family A member 1
    Names
    amyloid beta (A4) precursor protein-binding, family A, member 1 (X11)
    amyloid beta A4 precursor protein-binding, family A, member 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036888.1 Reference Clint_PTRv2 Primary Assembly

      Range
      56877566..57116583
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009456701.3XP_009454976.1  amyloid-beta A4 precursor protein-binding family A member 1 isoform X1

      See identical proteins and their annotated locations for XP_009454976.1

      UniProtKB/TrEMBL
      H2QXC2
      Related
      ENSPTRP00000035905.3
      Conserved Domains (3) summary
      cd00992
      Location:745818
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:452623
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:656739
      PDZ; PDZ domain (Also known as DHR or GLGF)
    2. XM_001138890.6XP_001138890.1  amyloid-beta A4 precursor protein-binding family A member 1 isoform X1

      See identical proteins and their annotated locations for XP_001138890.1

      UniProtKB/TrEMBL
      H2QXC2
      Conserved Domains (3) summary
      cd00992
      Location:745818
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:452623
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:656739
      PDZ; PDZ domain (Also known as DHR or GLGF)
    3. XM_009456702.3XP_009454977.1  amyloid-beta A4 precursor protein-binding family A member 1 isoform X2

      Related
      ENSPTRP00000076614.1
      Conserved Domains (3) summary
      cd00992
      Location:734807
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:452612
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:645728
      PDZ; PDZ domain (Also known as DHR or GLGF)
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