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    EPHA3 EPH receptor A3 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 460531, updated on 14-Feb-2019

    Summary

    Official Symbol
    EPHA3provided by VGNC
    Official Full Name
    EPH receptor A3provided by VGNC
    Primary source
    VGNC:VGNC:1809
    Locus tag
    CK820_G0043948
    See related
    Ensembl:ENSPTRG00000015127
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See EPHA3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 3 NC_036882.1 (89728456..90097472)
    104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 3 NC_006490.4 (90916732..91286357)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 3 NC_006490.3 (90741322..91112485)

    Chromosome 3 - NC_036882.1Genomic Context describing neighboring genes Neighboring gene little elongation complex subunit 2 pseudogene Neighboring gene uncharacterized LOC107970494 Neighboring gene small nucleolar RNA U3 Neighboring gene solute carrier family 35 member A1 pseudogene

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Axon guidance, organism-specific biosystem (from KEGG)
      Axon guidance, organism-specific biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...
    • Axon guidance, conserved biosystem (from KEGG)
      Axon guidance, conserved biosystemAxon guidance represents a key stage in the formation of neuronal network. Axons are guided by a variety of guidance factors, such as netrins, ephrins, Slits, and semaphorins. These guidance cues are...

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    ephrin type-A receptor 3
    Names
    ephrin receptor EphA3
    XP_009444180.2
    XP_009444181.2
    XP_516601.3

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036882.1 Reference Clint_PTRv2 Primary Assembly

      Range
      89728456..90097472
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_516601.5XP_516601.3  ephrin type-A receptor 3 isoform X1

      Related
      ENSPTRP00000026114.3
      Conserved Domains (6) summary
      cd10481
      Location:29201
      EphR_LBD_A3; Ligand Binding Domain of Ephrin type-A Receptor 3
      cd00063
      Location:437528
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05066
      Location:616882
      PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
      pfam00041
      Location:327417
      fn3; Fibronectin type III domain
      pfam14575
      Location:555616
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
      cl15755
      Location:912974
      SAM_superfamily; SAM (Sterile alpha motif )
    2. XM_009445906.2XP_009444181.2  ephrin type-A receptor 3 isoform X3

      Conserved Domains (5) summary
      cd10481
      Location:29201
      EphR_LBD_A3; Ligand Binding Domain of Ephrin type-A Receptor 3
      cd00063
      Location:437528
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05066
      Location:616882
      PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
      pfam00041
      Location:327417
      fn3; Fibronectin type III domain
      pfam14575
      Location:555616
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
    3. XM_009445905.3XP_009444180.2  ephrin type-A receptor 3 isoform X2

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