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    SDSL serine dehydratase like [ Pan troglodytes (chimpanzee) ]

    Gene ID: 452275, updated on 24-Mar-2019

    Summary

    Official Symbol
    SDSLprovided by VGNC
    Official Full Name
    serine dehydratase likeprovided by VGNC
    Primary source
    VGNC:VGNC:8531
    See related
    Ensembl:ENSPTRG00000005492
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See SDSL in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 12 NC_036891.1 (111089674..111105702)
    104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 12 NC_006479.4 (116548217..116564257)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 12 NC_006479.3 (113913741..113930746)

    Chromosome 12 - NC_036891.1Genomic Context describing neighboring genes Neighboring gene phospholipase B domain containing 2 Neighboring gene serine dehydratase Neighboring gene LIM homeobox 5 Neighboring gene uncharacterized LOC107967794

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Biosynthesis of amino acids, organism-specific biosystem (from KEGG)
      Biosynthesis of amino acids, organism-specific biosystemThis map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module fo...
    • Biosynthesis of amino acids, conserved biosystem (from KEGG)
      Biosynthesis of amino acids, conserved biosystemThis map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module fo...
    • Carbon metabolism, organism-specific biosystem (from KEGG)
      Carbon metabolism, organism-specific biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
    • Carbon metabolism, conserved biosystem (from KEGG)
      Carbon metabolism, conserved biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
    • Cysteine and methionine metabolism, organism-specific biosystem (from KEGG)
      Cysteine and methionine metabolism, organism-specific biosystemCysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted f...
    • Cysteine and methionine metabolism, conserved biosystem (from KEGG)
      Cysteine and methionine metabolism, conserved biosystemCysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted f...
    • Glycine, serine and threonine metabolism, organism-specific biosystem (from KEGG)
      Glycine, serine and threonine metabolism, organism-specific biosystemSerine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In ...
    • Glycine, serine and threonine metabolism, conserved biosystem (from KEGG)
      Glycine, serine and threonine metabolism, conserved biosystemSerine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In ...
    • Metabolic pathways, organism-specific biosystem (from KEGG)
      Metabolic pathways, organism-specific biosystem
      Metabolic pathways
    • Valine, leucine and isoleucine biosynthesis, organism-specific biosystem (from KEGG)
      Valine, leucine and isoleucine biosynthesis, organism-specific biosystem
      Valine, leucine and isoleucine biosynthesis
    • Valine, leucine and isoleucine biosynthesis, conserved biosystem (from KEGG)
      Valine, leucine and isoleucine biosynthesis, conserved biosystem
      Valine, leucine and isoleucine biosynthesis

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    serine dehydratase-like
    XP_001153764.1
    XP_009424595.1
    XP_016779804.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036891.1 Reference Clint_PTRv2 Primary Assembly

      Range
      111089674..111105702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001153764.6XP_001153764.1  serine dehydratase-like

      See identical proteins and their annotated locations for XP_001153764.1

      UniProtKB/TrEMBL
      H2Q6Y2
      Conserved Domains (1) summary
      cl00342
      Location:17326
      Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...
    2. XM_009426320.3XP_009424595.1  serine dehydratase-like

      See identical proteins and their annotated locations for XP_009424595.1

      UniProtKB/TrEMBL
      H2Q6Y2
      Related
      ENSPTRP00000009319.3
      Conserved Domains (1) summary
      cl00342
      Location:17326
      Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...
    3. XM_016924315.1XP_016779804.1  serine dehydratase-like

      UniProtKB/TrEMBL
      H2Q6Y2
      Related
      ENSPTRP00000085896.1, ENSPTRT00000099947.1
      Conserved Domains (1) summary
      cl00342
      Location:17326
      Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...
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