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    ftcd formimidoyltransferase cyclodeaminase [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 448617, updated on 20-Jun-2018

    Summary

    Symbol
    ftcdprovided by Xenbase
    Full Name
    formimidoyltransferase cyclodeaminaseprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-963745
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See ftcd in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (56108529..56133516)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668244.1 (48704116..48729108)

    Chromosome 9 - NC_030685.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat and transmembrane domain-containing protein 2-like Neighboring gene uncharacterized LOC101730980 Neighboring gene uncharacterized LOC105948358 Neighboring gene uncharacterized LOC101731122

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    Clone Names

    • MGC89380

    General protein information

    Preferred Names
    formimidoyltransferase-cyclodeaminase
    Names
    formiminotransferase cyclodeaminase
    NP_001006855.1
    XP_017952573.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006854.1NP_001006855.1  formimidoyltransferase-cyclodeaminase

      See identical proteins and their annotated locations for NP_001006855.1

      Status: PROVISIONAL

      Source sequence(s)
      BC076958
      UniProtKB/TrEMBL
      Q6DEY5
      Conserved Domains (2) summary
      pfam04961
      Location:340520
      FTCD_C; Formiminotransferase-cyclodeaminase
      cl26845
      Location:1328
      FTCD_N; Formiminotransferase domain, N-terminal subdomain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030685.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      56108529..56133516
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018097084.1XP_017952573.1  formimidoyltransferase-cyclodeaminase isoform X1

      UniProtKB/TrEMBL
      F7DJS4
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