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    tram1.L translocation associated membrane protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 446460, updated on 27-Jan-2018

    Summary

    Symbol
    tram1.L
    Full Name
    translocation associated membrane protein 1 L homeolog
    Primary source
    Xenbase:XB-GENE-944949
    Locus tag
    XELAEV_18003611mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    tram1; tram1l1
    Annotation information
    Annotation category: partial on reference assembly

    Genomic context

    See tram1.L in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694843.1 (17229..39985, complement)
    100 current Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016749600.1 (1..316, complement)

    NW_016749600.1Genomic Context describing neighboring genes

    NW_016694843.1Genomic Context describing neighboring genes Neighboring gene lactamase beta 2 L homeolog Neighboring gene X-linked Kx blood group related 9 L homeolog

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Protein processing in endoplasmic reticulum, organism-specific biosystem (from KEGG)
      Protein processing in endoplasmic reticulum, organism-specific biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...
    • Protein processing in endoplasmic reticulum, conserved biosystem (from KEGG)
      Protein processing in endoplasmic reticulum, conserved biosystemThe endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylate...

    General protein information

    Preferred Names
    translocating chain-associated membrane protein 1-like 1
    Names
    translocation associated membrane protein 1-like 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001093156.1NP_001086625.1  translocating chain-associated membrane protein 1-like 1

      See identical proteins and their annotated locations for NP_001086625.1

      Status: PROVISIONAL

      Source sequence(s)
      BC077197
      UniProtKB/Swiss-Prot
      Q6DED0
      Conserved Domains (2) summary
      smart00724
      Location:116325
      TLC; TRAM, LAG1 and CLN8 homology domains
      pfam08390
      Location:49114
      TRAM1; TRAM1-like protein

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NW_016694843.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      17229..39985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NW_016749600.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      1..316 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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