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    agps.L alkylglycerone phosphate synthase L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 446408, updated on 8-Apr-2017

    Summary

    Symbol
    agps.L
    Full Name
    alkylglycerone phosphate synthase L homeolog
    Primary source
    Xenbase:XB-GENE-960797
    Locus tag
    XELAEV_18044727mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    agps
    Annotation information
    Annotation category: partial on reference assembly

    Genomic context

    See agps.L in Genome Data Viewer
    Location:
    chromosome: 9_10L
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (67242446..67361108, complement)
    100 current Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016710067.1 (1..812, complement)

    Chromosome 9_10L - NC_030740.1Genomic Context describing neighboring genes Neighboring gene cytochrome c, testis L homeolog Neighboring gene phosphodiesterase 11A L homeolog Neighboring gene uncharacterized LOC108701379 Neighboring gene nuclear factor, erythroid 2 like 2 L homeolog

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General protein information

    Preferred Names
    alkyldihydroxyacetonephosphate synthase, peroxisomal
    NP_001086573.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001093104.1NP_001086573.1  alkyldihydroxyacetonephosphate synthase, peroxisomal

      See identical proteins and their annotated locations for NP_001086573.1

      Status: PROVISIONAL

      Source sequence(s)
      BC076825
      UniProtKB/TrEMBL
      Q6DFB5
      Conserved Domains (3) summary
      COG0277
      Location:169621
      GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
      pfam01565
      Location:175316
      FAD_binding_4; FAD binding domain
      pfam02913
      Location:354619
      FAD-oxidase_C; FAD linked oxidases, C-terminal domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030740.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      67242446..67361108 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NW_016710067.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      1..812 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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