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    POU1F1 POU class 1 homeobox 1 [ Ovis aries (sheep) ]

    Gene ID: 443370, updated on 9-Feb-2019

    Summary

    Gene symbol
    POU1F1
    Gene description
    POU class 1 homeobox 1
    See related
    Ensembl:ENSOARG00000017058
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Also known as
    PIT1
    Orthologs

    Genomic context

    See POU1F1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Oar_rambouillet_v1.0 (GCF_002742125.1) 1 NC_040252.1 (169008468..169024170, complement)
    102 previous assembly Oar_v4.0 (GCF_000298735.2) 1 NC_019458.2 (153853076..153870283, complement)

    Chromosome 1 - NC_040252.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein SA-like Neighboring gene charged multivesicular body protein 2B Neighboring gene calcium-binding mitochondrial carrier protein SCaMC-1-like Neighboring gene 5-hydroxytryptamine receptor 1F

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sheep Tissue Atlas
    • Description: Sheep total RNA was extracted from embryonic and adult tissues
    • BioProject: PRJEB6169
    • Publication: PMID 24904168
    • Analysis date: Mon Jan 29 09:33:46 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    pituitary-specific positive transcription factor 1
    Names
    GHF-1
    PIT-1
    growth hormone factor 1
    pituitary specific transcription factor 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001009350.1NP_001009350.1  pituitary-specific positive transcription factor 1

      See identical proteins and their annotated locations for NP_001009350.1

      Status: PROVISIONAL

      Source sequence(s)
      U88399
      UniProtKB/Swiss-Prot
      P79364
      Conserved Domains (2) summary
      smart00352
      Location:124198
      POU; Found in Pit-Oct-Unc transcription factors
      pfam00046
      Location:217270
      Homeobox; Homeobox domain

    RefSeqs of Annotated Genomes: Ovis aries Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Oar_rambouillet_v1.0 Primary Assembly

    Genomic

    1. NC_040252.1 Reference Oar_rambouillet_v1.0 Primary Assembly

      Range
      169008468..169024170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027968280.1XP_027824081.1  pituitary-specific positive transcription factor 1 isoform X2

    2. XM_012164660.3XP_012020050.1  pituitary-specific positive transcription factor 1 isoform X1

      Related
      ENSOARP00000018309
      Conserved Domains (2) summary
      smart00352
      Location:150224
      POU; Found in Pit-Oct-Unc transcription factors
      pfam00046
      Location:243296
      Homeobox; Homeobox domain
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