Format

Send to:

Choose Destination
    • Showing Current items.

    man2c1.L mannosidase, alpha, class 2C, member 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 431951, updated on 29-Apr-2017

    Summary

    Symbol
    man2c1.L
    Full Name
    mannosidase, alpha, class 2C, member 1 L homeolog
    Primary source
    Xenbase:XB-GENE-992253
    Locus tag
    XELAEV_18018104mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    man2c1

    Genomic context

    See man2c1.L in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (85292294..85324410)

    Chromosome 3L - NC_030728.1Genomic Context describing neighboring genes Neighboring gene COMM domain containing 4 L homeolog Neighboring gene nei-like DNA glycosylase 1 L homeolog Neighboring gene uncharacterized LOC108711335 Neighboring gene very long-chain acyl-CoA synthetase-like Neighboring gene hydroxylysine kinase L homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030728.1 Chromosome 3L Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General protein information

    Preferred Names
    mannosidase, alpha, class 2C, member 1 L homeolog
    NP_001084900.1
    XP_018106368.1
    XP_018106369.1
    XP_018106370.1
    XP_018106371.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001091431.1NP_001084900.1  mannosidase, alpha, class 2C, member 1 L homeolog

      See identical proteins and their annotated locations for NP_001084900.1

      Status: PROVISIONAL

      Source sequence(s)
      BC070781
      UniProtKB/TrEMBL
      Q6NRG9
      Conserved Domains (4) summary
      cd10813
      Location:268519
      GH38N_AMII_Man2C1; N-terminal catalytic domain of mammalian cytosolic alpha-mannosidase Man2C1 and similar proteins; glycoside hydrolase family 38 (GH38)
      COG0383
      Location:581019
      AMS1; Alpha-mannosidase [Carbohydrate transport and metabolism]
      pfam07748
      Location:6451039
      Glyco_hydro_38C; Glycosyl hydrolases family 38 C-terminal domain
      pfam09261
      Location:533612
      Alpha-mann_mid; Alpha mannosidase, middle domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030728.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      85292294..85324410
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018250882.1XP_018106371.1  mannosidase, alpha, class 2C, member 1 L homeolog isoform X2

      UniProtKB/TrEMBL
      A0A1L8H053
    2. XM_018250880.1XP_018106369.1  mannosidase, alpha, class 2C, member 1 L homeolog isoform X2

      UniProtKB/TrEMBL
      A0A1L8H053
    3. XM_018250881.1XP_018106370.1  mannosidase, alpha, class 2C, member 1 L homeolog isoform X2

      UniProtKB/TrEMBL
      A0A1L8H053
    4. XM_018250879.1XP_018106368.1  mannosidase, alpha, class 2C, member 1 L homeolog isoform X1

    Support Center