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    APBA1 amyloid beta precursor protein binding family A member 1 [ Gallus gallus (chicken) ]

    Gene ID: 427246, updated on 14-Feb-2019

    Summary

    Symbol
    APBA1provided by CGNC
    Full Name
    amyloid beta precursor protein binding family A member 1provided by CGNC
    Primary source
    CGNC:11243
    See related
    Ensembl:ENSGALG00000015111
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs

    Genomic context

    See APBA1 in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) Z NC_006127.5 (34711365..34792484, complement)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) Z NC_006127.4 (34699905..34781022, complement)
    102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) Z NC_006127.3 (34562198..34639842, complement)

    Chromosome Z - NC_006127.5Genomic Context describing neighboring genes Neighboring gene tight junction protein 2 Neighboring gene microRNA mir-1556 Neighboring gene family with sequence similarity 189 member A2 Neighboring gene protein prenyltransferase alpha subunit repeat containing 1 Neighboring gene MAM domain containing 2 Neighboring gene microRNA mir-1416

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    General protein information

    Preferred Names
    amyloid beta A4 precursor protein-binding family A member 1; amyloid-beta A4 precursor protein-binding family A member 1
    Names
    amyloid beta (A4) precursor protein-binding, family A, member 1 (X11)

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006127.5 Reference GRCg6a Primary Assembly

      Range
      34711365..34792484 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015280326.2XP_015135812.1  amyloid-beta A4 precursor protein-binding family A member 1 isoform X3

      Related
      ENSGALP00000070323.1, ENSGALT00000097007.1
      Conserved Domains (3) summary
      cd00992
      Location:698771
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:405576
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:609692
      PDZ; PDZ domain (Also known as DHR or GLGF)
    2. XM_004949153.3XP_004949210.1  amyloid-beta A4 precursor protein-binding family A member 1 isoform X2

      Related
      ENSGALP00000024333.4, ENSGALT00000024379.5
      Conserved Domains (3) summary
      cd00992
      Location:721794
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:439599
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:632715
      PDZ; PDZ domain (Also known as DHR or GLGF)
    3. XM_424829.6XP_424829.2  amyloid-beta A4 precursor protein-binding family A member 1 isoform X1

      Related
      ENSGALP00000050540.2, ENSGALT00000081952.2
      Conserved Domains (3) summary
      cd00992
      Location:732805
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:439610
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:643726
      PDZ; PDZ domain (Also known as DHR or GLGF)
    4. XM_004949151.3XP_004949208.2  amyloid-beta A4 precursor protein-binding family A member 1 isoform X1

      Related
      ENSGALP00000067473.1, ENSGALT00000100037.1
      Conserved Domains (3) summary
      cd00992
      Location:732805
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:439610
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:643726
      PDZ; PDZ domain (Also known as DHR or GLGF)
    5. XM_015280325.2XP_015135811.1  amyloid-beta A4 precursor protein-binding family A member 1 isoform X1

      Conserved Domains (3) summary
      cd00992
      Location:732805
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:439610
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:643726
      PDZ; PDZ domain (Also known as DHR or GLGF)
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