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    MYF6 myogenic factor 6 [ Gallus gallus (chicken) ]

    Gene ID: 417873, updated on 14-Feb-2019

    Summary

    Symbol
    MYF6provided by CGNC
    Full Name
    myogenic factor 6provided by CGNC
    Primary source
    CGNC:50612
    See related
    Ensembl:ENSGALG00000010936
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    cMRF4
    Orthologs

    Genomic context

    See MYF6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (40079800..40081925)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (39997995..39999570)
    102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 1 NC_006088.3 (39927239..39928719)

    Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene tenascin-R-like Neighboring gene protein tyrosine phosphatase, receptor type Q Neighboring gene myogenic factor 5 Neighboring gene lin-7 homolog A, crumbs cell polarity complex component

    Genomic regions, transcripts, and products

    Bibliography

    Pathways from BioSystems

    • Id Signaling Pathway, organism-specific biosystem (from WikiPathways)
      Id Signaling Pathway, organism-specific biosystemInhibitor of DNA binding (ID) proteins are members of the helix-loop-helix (HLH) family of proteins which lack a DNA binding domain themselves but bind to other family members inhibiting their DNA bi...

    General gene information

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    DNA-binding transcription activator activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    contributes_to E-box binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    RNA polymerase II proximal promoter sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein heterodimerization activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    muscle cell fate commitment IDA
    Inferred from Direct Assay
    more info
    PubMed 
    positive regulation of myoblast differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    positive regulation of myoblast fusion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    positive regulation of skeletal muscle fiber development IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    positive regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    positive regulation of transcription by RNA polymerase II IDA
    Inferred from Direct Assay
    more info
    PubMed 
    skeletal muscle cell differentiation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    RNA polymerase II transcription factor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    myogenic factor 6
    Names
    MRF4
    muscle-specific regulatory factor 4
    myf-6
    myogenic factor 6 (herculin)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030746.1NP_001025917.1  myogenic factor 6

      See identical proteins and their annotated locations for NP_001025917.1

      Status: PROVISIONAL

      Source sequence(s)
      D10599
      UniProtKB/Swiss-Prot
      Q01795
      UniProtKB/TrEMBL
      C4P6Q1
      Conserved Domains (2) summary
      pfam00010
      Location:94145
      HLH; Helix-loop-helix DNA-binding domain
      cl11603
      Location:398
      Basic; Myogenic Basic domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006088.5 Reference GRCg6a Primary Assembly

      Range
      40079800..40081925
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015281916.2XP_015137402.2  myogenic factor 6 isoform X1

      Related
      ENSGALP00000030023.4, ENSGALT00000030660.5
      Conserved Domains (2) summary
      pfam00010
      Location:94145
      HLH; Helix-loop-helix DNA-binding domain
      cl11603
      Location:398
      Basic; Myogenic Basic domain
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