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    pigf phosphatidylinositol glycan anchor biosynthesis, class F [ Danio rerio (zebrafish) ]

    Gene ID: 402942, updated on 14-Feb-2019

    Summary

    Official Symbol
    pigfprovided by ZNC
    Official Full Name
    phosphatidylinositol glycan anchor biosynthesis, class Fprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1801
    See related
    Ensembl:ENSDARG00000032780
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:77184
    Orthologs

    Genomic context

    See pigf in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (25097806..25110974)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (25006446..25019614)
    103 previous assembly Zv9 (GCF_000002035.4) 12 NC_007123.5 (26624153..26637969)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene GTP cyclohydrolase 2 Neighboring gene cysteine-rich PDZ-binding protein Neighboring gene ras homolog family member Q Neighboring gene cytochrome c oxidase subunit 7A2 like Neighboring gene potassium voltage-gated channel, subfamily G, member 3

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • MGC77184

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    phosphatidylinositol-glycan biosynthesis class F protein
    Names
    phosphatidylinositol glycan, class F
    NP_991208.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205645.1NP_991208.1  phosphatidylinositol-glycan biosynthesis class F protein

      See identical proteins and their annotated locations for NP_991208.1

      Status: PROVISIONAL

      Source sequence(s)
      BC065590
      UniProtKB/TrEMBL
      Q6P0J9
      Related
      ENSDARP00000050069.3, ENSDART00000050070.5
      Conserved Domains (1) summary
      pfam06699
      Location:21204
      PIG-F; GPI biosynthesis protein family Pig-F

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      25097806..25110974
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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