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    lhx1.L LIM homeobox 1 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 399323, updated on 27-Jan-2018

    Summary

    Official Symbol
    lhx1.L
    Official Full Name
    LIM homeobox 1 L homeolog
    Primary source
    Xenbase:XB-GENE-856460
    Locus tag
    XELAEV_18012165mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    lhx1; lim1; lim-1; xlim-1

    Genomic context

    See lhx1.L in Genome Data Viewer
    Location:
    chromosome: 2L
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (61058111..61067337, complement)

    Chromosome 2L - NC_030726.1Genomic Context describing neighboring genes Neighboring gene acetyl-CoA carboxylase-like Neighboring gene protein AATF-like Neighboring gene tetraspanin-18-like Neighboring gene cytochrome b5 reductase 1 L homeolog Neighboring gene adiponectin receptor 1 L homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030726.1 Chromosome 2L Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    General protein information

    Preferred Names
    LIM/homeobox protein Lhx1
    Names
    LIM homeobox protein 1
    homeobox protein Lim-1
    x-Lhx1
    xlim1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001090659.1NP_001084128.1  LIM/homeobox protein Lhx1

      See identical proteins and their annotated locations for NP_001084128.1

      Status: PROVISIONAL

      Source sequence(s)
      X63889
      UniProtKB/Swiss-Prot
      P29674
      UniProtKB/TrEMBL
      B7ZP59
      Conserved Domains (3) summary
      cd09367
      Location:455
      LIM1_Lhx1_Lhx5; The first LIM domain of Lhx1 (also known as Lim1) and Lhx5
      cd09375
      Location:63118
      LIM2_Lhx1_Lhx5; The second LIM domain of Lhx1 (also known as Lim1) and Lhx5
      pfam00046
      Location:182235
      Homeobox; Homeobox domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030726.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      61058111..61067337 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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