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    nptn.L neuroplastin L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 398501, updated on 19-Jan-2018

    Summary

    Symbol
    nptn.L
    Full Name
    neuroplastin L homeolog
    Primary source
    Xenbase:XB-GENE-1011676
    Locus tag
    XELAEV_18018030mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    nptn

    Genomic context

    See nptn.L in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (82720525..82757912, complement)

    Chromosome 3L - NC_030728.1Genomic Context describing neighboring genes Neighboring gene potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 pseudogene Neighboring gene potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4-like Neighboring gene CD276 molecule L homeolog Neighboring gene inhibitory synaptic factor 1 L homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030728.1 Chromosome 3L Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001089013.1NP_001082482.1  neuroplastin L homeolog precursor

      See identical proteins and their annotated locations for NP_001082482.1

      Status: PROVISIONAL

      Source sequence(s)
      BC126048
      UniProtKB/TrEMBL
      A0JMY2
      Conserved Domains (3) summary
      cd00096
      Location:147221
      Ig; Immunoglobulin domain
      smart00410
      Location:137225
      IG_like; Immunoglobulin like
      cl11960
      Location:74111
      Ig; Immunoglobulin domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030728.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      82720525..82757912 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018250831.1XP_018106320.1  neuroplastin L homeolog isoform X2

    2. XM_018250830.1XP_018106319.1  neuroplastin L homeolog isoform X2

    3. XM_018250829.1XP_018106318.1  neuroplastin L homeolog isoform X1

      UniProtKB/TrEMBL
      A0JMY2
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