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    polb.S polymerase (DNA directed), beta S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 397973, updated on 27-Jan-2018

    Summary

    Symbol
    polb.S
    Full Name
    polymerase (DNA directed), beta S homeolog
    Primary source
    Xenbase:XB-GENE-999702
    Locus tag
    XELAEV_18020165mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    polb

    Genomic context

    See polb.S in Genome Data Viewer
    Location:
    chromosome: 3S
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 3S NC_030729.1 (21858834..21876902)

    Chromosome 3S - NC_030729.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 501-like Neighboring gene RING finger protein 112-like Neighboring gene tissue-type plasminogen activator-like Neighboring gene adaptor related protein complex 3 subunit mu 2 S homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030729.1 Chromosome 3S Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • BER complex, organism-specific biosystem (from KEGG)
      BER complex, organism-specific biosystemStructural complex; Genetic information processing; Repair system
    • BER complex, conserved biosystem (from KEGG)
      BER complex, conserved biosystemStructural complex; Genetic information processing; Repair system
    • Base excision repair, organism-specific biosystem (from KEGG)
      Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
    • Base excision repair, conserved biosystem (from KEGG)
      Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...

    General protein information

    Preferred Names
    DNA polymerase beta
    NP_001081643.1
    XP_018109615.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001088174.1NP_001081643.1  DNA polymerase beta

      See identical proteins and their annotated locations for NP_001081643.1

      Status: PROVISIONAL

      Source sequence(s)
      BC106329
      UniProtKB/Swiss-Prot
      O57383
      UniProtKB/TrEMBL
      A0A1L8GRP9
      Conserved Domains (2) summary
      cd00141
      Location:13332
      NT_POLXc; Nucleotidyltransferase (NT) domain of family X DNA Polymerases
      smart00483
      Location:12333
      POLXc; DNA polymerase X family

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030729.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      21858834..21876902
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018254126.1XP_018109615.1  DNA polymerase beta isoform X1

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