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    cisd1 CDGSH iron sulfur domain 1 [ Danio rerio (zebrafish) ]

    Gene ID: 393577, updated on 14-Feb-2019

    Summary

    Official Symbol
    cisd1provided by ZNC
    Official Full Name
    CDGSH iron sulfur domain 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1162
    See related
    Ensembl:ENSDARG00000079516
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:63561; si:dkey-18n13.4

    Genomic context

    See cisd1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (41910342..41917029, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (41784372..41791059, complement)
    103 previous assembly Zv9 (GCF_000002035.4) 13 NC_007124.5 (42563323..42570010, complement)

    Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101884652 Neighboring gene inositol polyphosphate multikinase a Neighboring gene RNA polymerase I subunit B Neighboring gene N-acetylneuraminic acid phosphatase

    Genomic regions, transcripts, and products

    General gene information

    Homology

    Clone Names

    • MGC63561

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    2 iron, 2 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200605.1NP_956899.1  CDGSH iron sulfur domain 1

      See identical proteins and their annotated locations for NP_956899.1

      Status: PROVISIONAL

      Source sequence(s)
      BC056783
      UniProtKB/TrEMBL
      Q6PGY7
      Related
      ENSDARP00000099418.3, ENSDART00000110549.4
      Conserved Domains (1) summary
      smart00704
      Location:5492
      ZnF_CDGSH; CDGSH-type zinc finger. Function unknown

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007124.7 Reference GRCz11 Primary Assembly

      Range
      41910342..41917029 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394888.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      79006..85706 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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