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    cnmd.L chondromodulin L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 379773, updated on 8-Apr-2017

    Summary

    Official Symbol
    cnmd.L
    Official Full Name
    chondromodulin L homeolog
    Primary source
    Xenbase:XB-GENE-489330
    Locus tag
    XELAEV_18013231mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    chm1; chm-i; lect1; bricd3; lect1.L

    Genomic context

    See cnmd.L in Genome Data Viewer
    Location:
    chromosome: 2L
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (132558346..132594054)

    Chromosome 2L - NC_030726.1Genomic Context describing neighboring genes Neighboring gene protocadherin 8, gene 2 L homeolog Neighboring gene protocadherin 8 L homeolog Neighboring gene SGT1 homolog, MIS12 kinetochore complex assembly cochaperone L homeolog Neighboring gene E74 like ETS transcription factor 1 L homeolog Neighboring gene transfer RNA glutamic acid (anticodon UUC)

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030726.1 Chromosome 2L Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    chondromodulin L homeolog
    Names
    chondromodulin-I
    leukocyte cell derived chemotaxin 1 L homeolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001086612.1NP_001080081.1  chondromodulin L homeolog

      See identical proteins and their annotated locations for NP_001080081.1

      Status: PROVISIONAL

      Source sequence(s)
      BC043890
      UniProtKB/TrEMBL
      Q7ZY92
      Conserved Domains (2) summary
      smart00019
      Location:23201
      SF_P; Pulmonary surfactant proteins
      smart01039
      Location:104201
      BRICHOS; The BRICHOS domain is found in a variety of proteins implicated in dementia, respiratory distress and cancer

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030726.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      132558346..132594054
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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