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    POU1F1 POU class 1 homeobox 1 [ Gallus gallus (chicken) ]

    Gene ID: 374215, updated on 14-Apr-2019

    Summary

    Official Symbol
    POU1F1provided by CGNC
    Official Full Name
    POU class 1 homeobox 1provided by CGNC
    Primary source
    CGNC:11552
    See related
    Ensembl:ENSGALG00000015495
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    PIT1; GHF-1; PIT-1; Pit-1*
    Orthologs

    Genomic context

    See POU1F1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (94255838..94273551)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (92850762..92868428)
    102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 1 NC_006088.3 (92210788..92224203)

    Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107055089 Neighboring gene 5-hydroxytryptamine receptor 1F Neighboring gene uncharacterized LOC107055088 Neighboring gene charged multivesicular body protein 2B Neighboring gene vestigial like family member 3

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    DNA-binding transcription factor activity, RNA polymerase II-specific ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    positive regulation of transcription by RNA polymerase II ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    nucleus ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    pituitary-specific positive transcription factor 1
    Names
    POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1)
    Pit-1/GHF-1
    growth hormone factor 1
    pituitary specific transcription factor
    pituitary specific transcription factor-1
    pituitary-specific positive transcription factor 1 variant alpha

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_204319.1NP_989650.1  pituitary-specific positive transcription factor 1

      See identical proteins and their annotated locations for NP_989650.1

      Status: PROVISIONAL

      Source sequence(s)
      AF029892
      UniProtKB/TrEMBL
      O57599
      Related
      ENSGALP00000036048.3, ENSGALT00000036836.4
      Conserved Domains (2) summary
      smart00352
      Location:159233
      POU; Found in Pit-Oct-Unc transcription factors
      pfam00046
      Location:252305
      Homeobox; Homeobox domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006088.5 Reference GRCg6a Primary Assembly

      Range
      94255838..94273551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015295651.2XP_015151137.1  pituitary-specific positive transcription factor 1 isoform X1

      Related
      ENSGALP00000045301.1, ENSGALT00000080535.2
      Conserved Domains (2) summary
      smart00352
      Location:202276
      POU; Found in Pit-Oct-Unc transcription factors
      pfam00046
      Location:295348
      Homeobox; Homeobox domain
    2. XM_015295656.2XP_015151142.1  pituitary-specific positive transcription factor 1 isoform X2

      Conserved Domains (2) summary
      smart00352
      Location:174248
      POU; Found in Pit-Oct-Unc transcription factors
      pfam00046
      Location:267320
      Homeobox; Homeobox domain
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