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    gnrh2 gonadotropin-releasing hormone 2 [ Danio rerio (zebrafish) ]

    Gene ID: 353222, updated on 31-Mar-2019

    Summary

    Official Symbol
    gnrh2provided by ZNC
    Official Full Name
    gonadotropin-releasing hormone 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030516-1
    See related
    Ensembl:ENSDARG00000044754
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    GnRH-II; cGnRH-II
    Orthologs

    Genomic context

    See gnrh2 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (15824182..15828029)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (15728205..15732052)
    103 previous assembly Zv9 (GCF_000002035.4) 21 NC_007132.5 (14027250..14031097)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene isocitrate dehydrogenase 3 (NAD+) beta Neighboring gene protein tyrosine phosphatase receptor type A Neighboring gene si:dkeyp-87d8.8 Neighboring gene glucosaminyl (N-acetyl) transferase 4b

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • GnRH signaling pathway, organism-specific biosystem (from KEGG)
      GnRH signaling pathway, organism-specific biosystemGonadotropin-releasing hormone (GnRH) secretion from the hypothalamus acts upon its receptor in the anterior pituitary to regulate the production and release of the gonadotropins, LH and FSH. The GnR...
    • GnRH signaling pathway, conserved biosystem (from KEGG)
      GnRH signaling pathway, conserved biosystemGonadotropin-releasing hormone (GnRH) secretion from the hypothalamus acts upon its receptor in the anterior pituitary to regulate the production and release of the gonadotropins, LH and FSH. The GnR...

    General gene information

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    gonadotropin hormone-releasing hormone activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    gonadotropin-releasing hormone receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    hormone activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    brain development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    camera-type eye development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    reproduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    extracellular space IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    progonadoliberin-2
    Names
    cII gonadotropin releasing hormone

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_181439.4NP_852104.3  progonadoliberin-2 precursor

      See identical proteins and their annotated locations for NP_852104.3

      Status: VALIDATED

      Source sequence(s)
      CR847785
      UniProtKB/TrEMBL
      Q5Y835
      Related
      ENSDARP00000065778.2, ENSDART00000065779.3
      Conserved Domains (1) summary
      pfam00446
      Location:2534
      GnRH; Gonadotropin-releasing hormone

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      15824182..15828029
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395082.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      125838..129631
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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