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    Angptl2 angiopoietin-like 2 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 171100, updated on 21-Jul-2018

    Summary

    Official Symbol
    Angptl2provided by RGD
    Official Full Name
    angiopoietin-like 2provided by RGD
    Primary source
    RGD:620004
    See related
    Ensembl:ENSRNOG00000016678
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    may be associated with the angiotensin II type 1A receptor [RGD, Feb 2006]
    Expression
    Biased expression in Adrenal (RPKM 418.3), Heart (RPKM 328.9) and 9 other tissues See more
    Orthologs

    Genomic context

    See Angptl2 in Genome Data Viewer
    Location:
    3p11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (12262822..12292665)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 3 NC_005102.3 (17596289..17626136)

    Chromosome 3 - NC_005102.4Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 8 Neighboring gene GTPase activating Rap/RanGAP domain-like 3 Neighboring gene uncharacterized LOC102557449 Neighboring gene Ral GEF with PH domain and SH3 binding motif 1 Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene zinc finger and BTB domain containing 43

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    General protein information

    Preferred Names
    angiopoietin-related protein 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133569.1NP_598253.1  angiopoietin-related protein 2 precursor

      See identical proteins and their annotated locations for NP_598253.1

      Status: PROVISIONAL

      Source sequence(s)
      AF159049
      UniProtKB/TrEMBL
      Q9JJ03
      Related
      ENSRNOP00000022585.3, ENSRNOT00000022585.3
      Conserved Domains (1) summary
      cd00087
      Location:273487
      FReD; Fibrinogen-related domains (FReDs); C terminal globular domain of fibrinogen. Fibrinogen is involved in blood clotting, being activated by thrombin to assemble into fibrin clots. The N-termini of 2 times 3 chains come together to form a globular ...

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005102.4 Reference Rnor_6.0 Primary Assembly

      Range
      12262822..12292665
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Rn_Celera

    Genomic

    1. AC_000071.1 Alternate Rn_Celera

      Range
      11255293..11285095
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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