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    Actg2 actin, gamma 2, smooth muscle, enteric [ Mus musculus (house mouse) ]

    Gene ID: 11468, updated on 31-Jan-2019

    Summary

    Official Symbol
    Actg2provided by MGI
    Official Full Name
    actin, gamma 2, smooth muscle, entericprovided by MGI
    Primary source
    MGI:MGI:104589
    See related
    Ensembl:ENSMUSG00000059430
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Act4; SMGA; ACTA3; Act-4
    Expression
    Biased expression in bladder adult (RPKM 2840.7), colon adult (RPKM 638.4) and 4 other tissues See more
    Orthologs

    Genomic context

    See Actg2 in Genome Data Viewer
    Location:
    6 C3; 6 35.94 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 6 NC_000072.6 (83512909..83536251, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (83462903..83486245, complement)

    Chromosome 6 - NC_000072.6Genomic Context describing neighboring genes Neighboring gene tet methylcytosine dioxygenase 3 Neighboring gene RIKEN cDNA B230319C09 gene Neighboring gene deoxyguanosine kinase Neighboring gene predicted gene, 38844 Neighboring gene STAM binding protein Neighboring gene DENN/MADD domain containing 4C pseudogene Neighboring gene predicted gene, 21284

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cell periphery IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    actin, gamma-enteric smooth muscle
    Names
    alpha-actin-3
    gamma-2-actin
    smooth muscle gamma-actin

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_009610.2NP_033740.2  actin, gamma-enteric smooth muscle

      See identical proteins and their annotated locations for NP_033740.2

      Status: VALIDATED

      Source sequence(s)
      AI154766, AK168649, BY778654
      Consensus CDS
      CCDS51822.1
      UniProtKB/Swiss-Prot
      P63268
      UniProtKB/TrEMBL
      Q3UJ36
      Related
      ENSMUSP00000074658.5, ENSMUST00000075161.11
      Conserved Domains (1) summary
      PTZ00281
      Location:1376
      PTZ00281; actin; Provisional

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000072.6 Reference GRCm38.p4 C57BL/6J

      Range
      83512909..83536251 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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