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    Ptpro protein tyrosine phosphatase receptor type O [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100714951, updated on 16-Feb-2019

    Summary

    Gene symbol
    Ptpro
    Gene description
    protein tyrosine phosphatase receptor type O
    See related
    Ensembl:ENSCPOG00000014389
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs

    Genomic context

    See Ptpro in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    103 current Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176391.1 (9348097..9564027)

    NT_176391.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106027872 Neighboring gene RAS like estrogen regulated growth inhibitor Neighboring gene small nucleolar RNA U13 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene epidermal growth factor receptor pathway substrate 8 Neighboring gene serine/threonine kinase receptor associated protein

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NT_176391 Unplaced Scaffold Reference Cavpor3.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    receptor-type tyrosine-protein phosphatase O

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Cavia porcellus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cavpor3.0 Primary Assembly

    Genomic

    1. NT_176391.1 Reference Cavpor3.0 Primary Assembly

      Range
      9348097..9564027
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013153129.2XP_013008583.2  receptor-type tyrosine-protein phosphatase O isoform X1

      Related
      ENSCPOP00000012963.2, ENSCPOT00000014534.3
      Conserved Domains (3) summary
      cd00047
      Location:9651193
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
      cd00063
      Location:434526
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:725805
      fn3; Fibronectin type III domain
    2. XM_023565300.1XP_023421068.1  receptor-type tyrosine-protein phosphatase O isoform X2

      Related
      ENSCPOP00000029202.1, ENSCPOT00000036204.1
      Conserved Domains (3) summary
      cd00047
      Location:9371165
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
      cd00063
      Location:434526
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:725805
      fn3; Fibronectin type III domain
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