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    APBA1 amyloid beta precursor protein binding family A member 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 100686233, updated on 26-Sep-2018

    Summary

    Official Symbol
    APBA1provided by VGNC
    Official Full Name
    amyloid beta precursor protein binding family A member 1provided by VGNC
    Primary source
    VGNC:VGNC:37974
    See related
    Ensembl:ENSCAFG00000001897
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See APBA1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 1 NC_006583.3 (87787039..87980204)

    Chromosome 1 - NC_006583.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106559459 Neighboring gene chromosome 1 C9orf135 homolog Neighboring gene protein prenyltransferase alpha subunit repeat containing 1 Neighboring gene uncharacterized LOC106559460 Neighboring gene uncharacterized LOC102155525 Neighboring gene uncharacterized LOC111096747

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006583.3 Chromosome 1 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    amyloid beta A4 precursor protein-binding family A member 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006583.3 Reference CanFam3.1 Primary Assembly

      Range
      87787039..87980204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022421396.1XP_022277104.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X2

      Conserved Domains (3) summary
      cd00992
      Location:827900
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:480705
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:738821
      PDZ; PDZ domain (Also known as DHR or GLGF)
    2. XM_022421384.1XP_022277092.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X1

      Conserved Domains (3) summary
      cd00992
      Location:838911
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:480716
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:749832
      PDZ; PDZ domain (Also known as DHR or GLGF)
    3. XM_022421403.1XP_022277111.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X4

      Conserved Domains (3) summary
      cd00992
      Location:762835
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:480640
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:673756
      PDZ; PDZ domain (Also known as DHR or GLGF)
    4. XM_022421390.1XP_022277098.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X1

      Conserved Domains (3) summary
      cd00992
      Location:838911
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:480716
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:749832
      PDZ; PDZ domain (Also known as DHR or GLGF)
    5. XM_022421395.1XP_022277103.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X1

      Conserved Domains (3) summary
      cd00992
      Location:838911
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:480716
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:749832
      PDZ; PDZ domain (Also known as DHR or GLGF)
    6. XM_022421391.1XP_022277099.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X1

      Conserved Domains (3) summary
      cd00992
      Location:838911
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:480716
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:749832
      PDZ; PDZ domain (Also known as DHR or GLGF)
    7. XM_022421399.1XP_022277107.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X3

      Related
      ENSCAFP00000002783.2, ENSCAFT00000003001.3
      Conserved Domains (3) summary
      cd00992
      Location:773846
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:480651
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:684767
      PDZ; PDZ domain (Also known as DHR or GLGF)
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