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    TUBB3 tubulin beta 3 class III [ Pan troglodytes (chimpanzee) ]

    Gene ID: 100613658, updated on 14-Feb-2019

    Summary

    Official Symbol
    TUBB3provided by VGNC
    Official Full Name
    tubulin beta 3 class IIIprovided by VGNC
    Primary source
    VGNC:VGNC:13805
    Locus tag
    CK820_G0051601
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See TUBB3 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 16 NC_036895.1 (75720795..75732663)
    104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 16 NC_006483.4 (81427043..81438976)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 16 NC_006483.3 (89660412..89672428)

    Chromosome 16 - NC_036895.1Genomic Context describing neighboring genes Neighboring gene transcription factor 25 Neighboring gene melanocortin 1 receptor Neighboring gene differentially expressed in FDCP 8 homolog Neighboring gene AFG3-like protein 1 Neighboring gene CENPB DNA-binding domain containing 1

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • Gap junction, organism-specific biosystem (from KEGG)
      Gap junction, organism-specific biosystemGap junctions contain intercellular channels that allow direct communication between the cytosolic compartments of adjacent cells. Each gap junction channel is formed by docking of two 'hemichannels'...
    • Gap junction, conserved biosystem (from KEGG)
      Gap junction, conserved biosystemGap junctions contain intercellular channels that allow direct communication between the cytosolic compartments of adjacent cells. Each gap junction channel is formed by docking of two 'hemichannels'...
    • Phagosome, organism-specific biosystem (from KEGG)
      Phagosome, organism-specific biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...
    • Phagosome, conserved biosystem (from KEGG)
      Phagosome, conserved biosystemPhagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is...

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001279958.1NP_001266887.1  tubulin beta-3 chain

      See identical proteins and their annotated locations for NP_001266887.1

      Status: PROVISIONAL

      Source sequence(s)
      AK306838
      UniProtKB/TrEMBL
      G2HJC4
      Conserved Domains (2) summary
      PLN00220
      Location:1447
      PLN00220; tubulin beta chain; Provisional
      cd02187
      Location:2426
      beta_tubulin; The beta-tubulin family

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036895.1 Reference Clint_PTRv2 Primary Assembly

      Range
      75720795..75732663
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009431443.2XP_009429718.2  tubulin beta-3 chain isoform X1

      Conserved Domains (1) summary
      PLN00220
      Location:1375
      PLN00220; tubulin beta chain; Provisional
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