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    A1CF APOBEC1 complementation factor [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100600191, updated on 19-Jan-2018

    Summary

    Gene symbol
    A1CF
    Gene description
    APOBEC1 complementation factor
    See related
    Ensembl:ENSNLEG00000012028
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Orthologs

    Genomic context

    See A1CF in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    102 current Nleu_3.0 (GCF_000146795.2) 3 NC_019818.1 (47628475..47718311, complement)

    Chromosome 3 - NC_019818.1Genomic Context describing neighboring genes Neighboring gene sphingomyelin synthase 1 Neighboring gene N-acylsphingosine amidohydrolase 2 Neighboring gene coiled-coil domain-containing protein 58 pseudogene Neighboring gene protein kinase cGMP-dependent 1 Neighboring gene cleavage stimulation factor subunit 2 tau variant

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_019818.1 Chromosome 3 Reference Nleu_3.0

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    APOBEC1 complementation factor

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Nleu_3.0

    Genomic

    1. NC_019818.1 Reference Nleu_3.0

      Range
      47628475..47718311 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003255157.2XP_003255205.1  APOBEC1 complementation factor isoform X2

      Conserved Domains (5) summary
      cd12486
      Location:55132
      RRM1_ACF; RNA recognition motif 1 found in vertebrate APOBEC-1 complementation factor (ACF)
      cd12490
      Location:134218
      RRM2_ACF; RNA recognition motif 2 in vertebrate APOBEC-1 complementation factor (ACF)
      cd12498
      Location:223305
      RRM3_ACF; RNA recognition motif 3 in vertebrate APOBEC-1 complementation factor (ACF)
      TIGR01648
      Location:2587
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
      pfam14709
      Location:439515
      DND1_DSRM; double strand RNA binding domain from DEAD END PROTEIN 1
    2. XM_012505856.1XP_012361310.1  APOBEC1 complementation factor isoform X3

      See identical proteins and their annotated locations for XP_012361310.1

      Conserved Domains (5) summary
      cd12486
      Location:29106
      RRM1_ACF; RNA recognition motif 1 found in vertebrate APOBEC-1 complementation factor (ACF)
      cd12490
      Location:108192
      RRM2_ACF; RNA recognition motif 2 in vertebrate APOBEC-1 complementation factor (ACF)
      cd12498
      Location:197279
      RRM3_ACF; RNA recognition motif 3 in vertebrate APOBEC-1 complementation factor (ACF)
      TIGR01648
      Location:5569
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
      pfam14709
      Location:421497
      DND1_DSRM; double strand RNA binding domain from DEAD END PROTEIN 1
    3. XM_012505857.1XP_012361311.1  APOBEC1 complementation factor isoform X4

      See identical proteins and their annotated locations for XP_012361311.1

      Related
      ENSNLEP00000033488.1, ENSNLET00000043761.1
      Conserved Domains (5) summary
      cd12486
      Location:29106
      RRM1_ACF; RNA recognition motif 1 found in vertebrate APOBEC-1 complementation factor (ACF)
      cd12490
      Location:108192
      RRM2_ACF; RNA recognition motif 2 in vertebrate APOBEC-1 complementation factor (ACF)
      cd12498
      Location:197279
      RRM3_ACF; RNA recognition motif 3 in vertebrate APOBEC-1 complementation factor (ACF)
      TIGR01648
      Location:5561
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
      pfam14709
      Location:413489
      DND1_DSRM; double strand RNA binding domain from DEAD END PROTEIN 1
    4. XM_012505855.1XP_012361309.1  APOBEC1 complementation factor isoform X1

      UniProtKB/TrEMBL
      G1RN23
      Related
      ENSNLEP00000014637.1, ENSNLET00000015369.2
      Conserved Domains (5) summary
      cd12486
      Location:55132
      RRM1_ACF; RNA recognition motif 1 found in vertebrate APOBEC-1 complementation factor (ACF)
      cd12490
      Location:134218
      RRM2_ACF; RNA recognition motif 2 in vertebrate APOBEC-1 complementation factor (ACF)
      cd12498
      Location:223305
      RRM3_ACF; RNA recognition motif 3 in vertebrate APOBEC-1 complementation factor (ACF)
      TIGR01648
      Location:2595
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
      pfam14709
      Location:447523
      DND1_DSRM; double strand RNA binding domain from DEAD END PROTEIN 1
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