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    a1cf APOBEC1 complementation factor [ Anolis carolinensis (green anole) ]

    Gene ID: 100553455, updated on 5-Aug-2017

    Summary

    Gene symbol
    a1cf
    Gene description
    APOBEC1 complementation factor
    See related
    Ensembl:ENSACAG00000015269
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anolis carolinensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
    Orthologs

    Genomic context

    See a1cf in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current AnoCar2.0 (GCF_000090745.1) Unplaced Scaffold NW_003338793.1 (1350394..1396166, complement)

    NW_003338793.1Genomic Context describing neighboring genes Neighboring gene multiple inositol-polyphosphate phosphatase 1 Neighboring gene sphingomyelin synthase 1 Neighboring gene speedy protein 1-B-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003338793.1 Unplaced Scaffold Reference AnoCar2.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    APOBEC1 complementation factor

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Anolis carolinensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AnoCar2.0 Primary Assembly

    Genomic

    1. NW_003338793.1 Reference AnoCar2.0 Primary Assembly

      Range
      1350394..1396166 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008116306.2XP_008114513.1  APOBEC1 complementation factor isoform X2

      UniProtKB/TrEMBL
      H9GM66
      Related
      ENSACAP00000015067.3, ENSACAT00000015371.3
      Conserved Domains (5) summary
      cd12486
      Location:55132
      RRM1_ACF; RNA recognition motif 1 found in vertebrate APOBEC-1 complementation factor (ACF)
      cd12498
      Location:223305
      RRM3_ACF; RNA recognition motif 3 in vertebrate APOBEC-1 complementation factor (ACF)
      TIGR01648
      Location:2581
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
      pfam14709
      Location:440516
      DND1_DSRM; double strand RNA binding domain from DEAD END PROTEIN 1
      cl17169
      Location:134218
      RRM_SF; RNA recognition motif (RRM) superfamily
    2. XM_003224374.3XP_003224422.1  APOBEC1 complementation factor isoform X1

      Conserved Domains (5) summary
      cd12486
      Location:55132
      RRM1_ACF; RNA recognition motif 1 found in vertebrate APOBEC-1 complementation factor (ACF)
      cd12498
      Location:223305
      RRM3_ACF; RNA recognition motif 3 in vertebrate APOBEC-1 complementation factor (ACF)
      TIGR01648
      Location:2589
      hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
      pfam14709
      Location:448524
      DND1_DSRM; double strand RNA binding domain from DEAD END PROTEIN 1
      cl17169
      Location:134218
      RRM_SF; RNA recognition motif (RRM) superfamily
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