Format

Send to:

Choose Destination
    • Showing Current items.

    LOC100539678 serine dehydratase-like [ Meleagris gallopavo (turkey) ]

    Gene ID: 100539678, updated on 8-Apr-2017

    Summary

    Gene symbol
    LOC100539678
    Gene description
    serine dehydratase-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Meleagris gallopavo
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris

    Genomic context

    See LOC100539678 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current Turkey_5.0 (GCF_000146605.2) 17 NC_015027.2 (12970067..12973728, complement)
    Build 1.1 previous assembly Turkey_2.01 (GCF_000146605.1) 17 NC_015027.1 (13166776..13196533, complement)

    Chromosome 17 - NC_015027.2Genomic Context describing neighboring genes Neighboring gene kinase suppressor of Ras 2-like Neighboring gene sodium/potassium/calcium exchanger 6, mitochondrial Neighboring gene two pore segment channel 1 Neighboring gene uncharacterized LOC109370389 Neighboring gene phospholipase B domain containing 2

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Biosynthesis of amino acids, organism-specific biosystem (from KEGG)
      Biosynthesis of amino acids, organism-specific biosystemThis map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module fo...
    • Biosynthesis of amino acids, conserved biosystem (from KEGG)
      Biosynthesis of amino acids, conserved biosystemThis map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module fo...
    • Carbon metabolism, organism-specific biosystem (from KEGG)
      Carbon metabolism, organism-specific biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
    • Carbon metabolism, conserved biosystem (from KEGG)
      Carbon metabolism, conserved biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
    • Cysteine and methionine metabolism, organism-specific biosystem (from KEGG)
      Cysteine and methionine metabolism, organism-specific biosystemCysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted f...
    • Cysteine and methionine metabolism, conserved biosystem (from KEGG)
      Cysteine and methionine metabolism, conserved biosystemCysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted f...
    • Glycine, serine and threonine metabolism, organism-specific biosystem (from KEGG)
      Glycine, serine and threonine metabolism, organism-specific biosystemSerine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In ...
    • Glycine, serine and threonine metabolism, conserved biosystem (from KEGG)
      Glycine, serine and threonine metabolism, conserved biosystemSerine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In ...
    • Metabolic pathways, organism-specific biosystem (from KEGG)
      Metabolic pathways, organism-specific biosystem
      Metabolic pathways
    • Valine, leucine and isoleucine biosynthesis, organism-specific biosystem (from KEGG)
      Valine, leucine and isoleucine biosynthesis, organism-specific biosystem
      Valine, leucine and isoleucine biosynthesis
    • Valine, leucine and isoleucine biosynthesis, conserved biosystem (from KEGG)
      Valine, leucine and isoleucine biosynthesis, conserved biosystem
      Valine, leucine and isoleucine biosynthesis

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Meleagris gallopavo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Turkey_5.0 Primary Assembly

    Genomic

    1. NC_015027.2 Reference Turkey_5.0 Primary Assembly

      Range
      12970067..12973728 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010720582.2XP_010718884.1  serine dehydratase-like

      Conserved Domains (2) summary
      pfam00291
      Location:17308
      PALP; Pyridoxal-phosphate dependent enzyme
      cl00342
      Location:15323
      Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...
    Support Center