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    acp5 acid phosphatase 5, tartrate resistant [ Ictalurus punctatus (channel catfish) ]

    Gene ID: 100528291, updated on 13-Oct-2018

    Summary

    Gene symbol
    acp5
    Gene description
    acid phosphatase 5, tartrate resistant
    See related
    Ensembl:ENSIPUG00000004837
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ictalurus punctatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Siluriformes; Ictaluridae; Ictalurus
    Also known as
    ppa5
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs

    Genomic context

    See acp5 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current IpCoco_1.2 (GCF_001660625.1) 12 NC_030427.1 (12450938..12454951)

    Chromosome 12 - NC_030427.1Genomic Context describing neighboring genes Neighboring gene protein Wiz-like Neighboring gene spermatid perinuclear RNA-binding protein-like Neighboring gene sodium/potassium-transporting ATPase subunit alpha-3-like Neighboring gene POU domain, class 2, transcription factor 2-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030427.1 Chromosome 12 Reference IpCoco_1.2 Primary Assembly

    Pathways from BioSystems

    General protein information

    Preferred Names
    tartrate-resistant acid phosphatase type 5
    NP_001187490.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001200561.1NP_001187490.1  tartrate-resistant acid phosphatase type 5 precursor

      See identical proteins and their annotated locations for NP_001187490.1

      Status: PROVISIONAL

      Source sequence(s)
      GU588753
      UniProtKB/TrEMBL
      E3TEH1
      Related
      ENSIPUP00000007007.1, ENSIPUT00000007311.1
      Conserved Domains (2) summary
      cd07378
      Location:32315
      MPP_ACP5; Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain
      pfam00149
      Location:32247
      Metallophos; Calcineurin-like phosphoesterase

    RefSeqs of Annotated Genomes: Ictalurus punctatus Annotation Release 100

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IpCoco_1.2 Primary Assembly

    Genomic

    1. NC_030427.1 Reference IpCoco_1.2 Primary Assembly

      Range
      12450938..12454951
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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