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    lgr5.L leucine-rich repeat containing G protein-coupled receptor 5 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100526795, updated on 27-Jan-2018

    Summary

    Symbol
    lgr5.L
    Full Name
    leucine-rich repeat containing G protein-coupled receptor 5 L homeolog
    Primary source
    Xenbase:XB-GENE-11536385
    Locus tag
    XELAEV_18017557mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    lgr5; lgr5a; lgr5-a

    Genomic context

    See lgr5.L in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (52100640..52212106)

    Chromosome 3L - NC_030728.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 8 L homeolog Neighboring gene uncharacterized LOC108711101 Neighboring gene zinc finger, C3H1-type containing L homeolog Neighboring gene transmembrane protein 19 L homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030728.1 Chromosome 3L Reference Xenopus_laevis_v2 Primary Assembly

    General protein information

    Preferred Names
    leucine-rich repeat-containing G-protein coupled receptor 5A
    Names
    leucine-rich repeat-containing G protein-coupled receptor 5
    leucine-rich repeat-containing G-protein coupled receptor 5a

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001199223.1NP_001186152.1  leucine-rich repeat-containing G-protein coupled receptor 5A precursor

      See identical proteins and their annotated locations for NP_001186152.1

      Status: PROVISIONAL

      Source sequence(s)
      GU296021
      UniProtKB/Swiss-Prot
      E5DHB5
      Conserved Domains (7) summary
      smart00013
      Location:3261
      LRRNT; Leucine rich repeat N-terminal domain
      cd00116
      Location:160406
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00031
      Location:304326
      LRR_1; leucine-rich repeat [structural motif]
      sd00033
      Location:6588
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00001
      Location:571816
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      pfam13855
      Location:185243
      LRR_8; Leucine rich repeat
      cl21561
      Location:562738
      7tm_4; Olfactory receptor

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030728.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      52100640..52212106
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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