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    PTPRO protein tyrosine phosphatase receptor type O [ Sus scrofa (pig) ]

    Gene ID: 100524563, updated on 16-Feb-2019

    Summary

    Gene symbol
    PTPRO
    Gene description
    protein tyrosine phosphatase receptor type O
    See related
    Ensembl:ENSSSCG00000000601
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Expression
    Broad expression in kidney (RPKM 7.5), lung (RPKM 2.1) and 5 other tissues See more
    Orthologs

    Genomic context

    See PTPRO in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (57021819..57263395, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (60237424..60286938)

    Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene epidermal growth factor receptor pathway substrate 8 Neighboring gene RAS like estrogen regulated growth inhibitor Neighboring gene uncharacterized LOC106510355

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase O

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

      Range
      57021819..57263395 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003126453.4XP_003126501.2  LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase O

      Related
      ENSSSCP00000000631.3, ENSSSCT00000000646.3
      Conserved Domains (3) summary
      cd00047
      Location:9641192
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
      cd00063
      Location:529629
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      pfam00041
      Location:434520
      fn3; Fibronectin type III domain
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