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    CLEC2D C-type lectin domain family 2 member D [ Sus scrofa (pig) ]

    Gene ID: 100521013, updated on 8-Dec-2018

    Summary

    Gene symbol
    CLEC2D
    Gene description
    C-type lectin domain family 2 member D
    See related
    Ensembl:ENSSSCG00000000657
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Expression
    Broad expression in spleen (RPKM 124.5), lung (RPKM 70.0) and 7 other tissues See more
    Orthologs

    Genomic context

    See CLEC2D in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (62187295..62227333, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (65023644..65062476, complement)

    Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110260744 Neighboring gene uncharacterized LOC106507520 Neighboring gene killer cell lectin like receptor B1 Neighboring gene transfer RNA lysine (anticodon UUU)

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    C-type lectin domain family 2 member D

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

      Range
      62187295..62227333 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003126493.4XP_003126541.1  C-type lectin domain family 2 member D isoform X1

      Conserved Domains (1) summary
      cl25419
      Location:16191
      PHA02642; C-type lectin-like protein; Provisional
    2. XM_003126492.4XP_003126540.1  C-type lectin domain family 2 member D isoform X2

      UniProtKB/TrEMBL
      K7GP34
      Related
      ENSSSCP00000029643.2, ENSSSCT00000034328.2
      Conserved Domains (1) summary
      cd03593
      Location:81191
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    3. XM_021092371.1XP_020948030.1  C-type lectin domain family 2 member D isoform X1

      Conserved Domains (1) summary
      cl25419
      Location:16191
      PHA02642; C-type lectin-like protein; Provisional
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