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    APBA1 amyloid beta precursor protein binding family A member 1 [ Ailuropoda melanoleuca (giant panda) ]

    Gene ID: 100483732, updated on 3-Apr-2017

    Summary

    Gene symbol
    APBA1
    Gene description
    amyloid beta precursor protein binding family A member 1
    Locus tag
    PANDA_002705
    See related
    Ensembl:ENSAMEG00000006989
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ailuropoda melanoleuca
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
    Orthologs

    Genomic context

    See APBA1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    102 current AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217349.1 (446053..642975, complement)

    NW_003217349.1Genomic Context describing neighboring genes Neighboring gene tight junction protein 2 Neighboring gene family with sequence similarity 189 member A2 Neighboring gene chromosome unknown C9orf135 homolog Neighboring gene protein prenyltransferase alpha subunit repeat containing 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003217349.1 Unplaced Scaffold Reference AilMel_1.0 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    amyloid beta A4 precursor protein-binding family A member 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AilMel_1.0 Primary Assembly

    Genomic

    1. NW_003217349.1 Reference AilMel_1.0 Primary Assembly

      Range
      446053..642975 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011219096.2XP_011217398.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X3

      Conserved Domains (3) summary
      cd00992
      Location:706779
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:453584
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:617700
      PDZ; PDZ domain (Also known as DHR or GLGF)
    2. XM_011219095.2XP_011217397.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X2

      Conserved Domains (3) summary
      cd00992
      Location:735808
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:453613
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:646729
      PDZ; PDZ domain (Also known as DHR or GLGF)
    3. XM_002914736.3XP_002914782.1  amyloid beta A4 precursor protein-binding family A member 1 isoform X1

      UniProtKB/TrEMBL
      G1LKB3
      Related
      ENSAMEP00000007373.1, ENSAMET00000007682.1
      Conserved Domains (3) summary
      cd00992
      Location:746819
      PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
      cd01208
      Location:453624
      PTB_X11; X11-like Phosphotyrosine-binding (PTB) domain
      pfam00595
      Location:657740
      PDZ; PDZ domain (Also known as DHR or GLGF)
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