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    ATF7IP activating transcription factor 7 interacting protein [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100460185, updated on 9-Oct-2018

    Summary

    Gene symbol
    ATF7IP
    Gene description
    activating transcription factor 7 interacting protein
    Locus tag
    CR201_G0041067
    See related
    Ensembl:ENSPPYG00000004318
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs

    Genomic context

    See ATF7IP in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Susie_PABv2 (GCF_002880775.1) 12 NC_036915.1 (14751593..14893380)
    102 previous assembly P_pygmaeus_2.0.2 (GCF_000001545.4) 12 NC_012603.1 (14808277..14926559)

    Chromosome 12 - NC_036915.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L30-like Neighboring gene phospholipase B domain containing 1 Neighboring gene uncharacterized LOC103891989 Neighboring gene guanylate cyclase 2C

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    activating transcription factor 7-interacting protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pongo abelii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Susie_PABv2 Primary Assembly

    Genomic

    1. NC_036915.1 Reference Susie_PABv2 Primary Assembly

      Range
      14751593..14893380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024256546.1XP_024112314.1  activating transcription factor 7-interacting protein 1 isoform X3

      Conserved Domains (6) summary
      pfam16788
      Location:564774
      ATF7IP_BD; ATF-interacting protein binding domain
      pfam16794
      Location:11601260
      fn3_4; Fibronectin-III type domain
      cl25732
      Location:316604
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:6671158
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:193435
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      cl28033
      Location:102267
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    2. XM_024256547.1XP_024112315.1  activating transcription factor 7-interacting protein 1 isoform X4

      Conserved Domains (6) summary
      pfam16788
      Location:563773
      ATF7IP_BD; ATF-interacting protein binding domain
      pfam16794
      Location:11591259
      fn3_4; Fibronectin-III type domain
      cl25732
      Location:316603
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:6661157
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:193435
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      cl28033
      Location:102267
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    3. XM_009247500.2XP_009245775.2  activating transcription factor 7-interacting protein 1 isoform X7

      Conserved Domains (5) summary
      pfam16788
      Location:564774
      ATF7IP_BD; ATF-interacting protein binding domain
      cl25732
      Location:316604
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:6661079
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:193435
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      cl28033
      Location:102267
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    4. XM_024256544.1XP_024112312.1  activating transcription factor 7-interacting protein 1 isoform X1

      Conserved Domains (6) summary
      pfam16788
      Location:572782
      ATF7IP_BD; ATF-interacting protein binding domain
      pfam16794
      Location:11681268
      fn3_4; Fibronectin-III type domain
      cl25732
      Location:324612
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:6751166
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:201443
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      cl28033
      Location:110275
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    5. XM_024256545.1XP_024112313.1  activating transcription factor 7-interacting protein 1 isoform X2

      Conserved Domains (6) summary
      pfam16788
      Location:571781
      ATF7IP_BD; ATF-interacting protein binding domain
      pfam16794
      Location:11671267
      fn3_4; Fibronectin-III type domain
      cl25732
      Location:324611
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:6741165
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:201443
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      cl28033
      Location:110275
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    6. XM_024256548.1XP_024112316.1  activating transcription factor 7-interacting protein 1 isoform X5

      Conserved Domains (6) summary
      pfam16788
      Location:555765
      ATF7IP_BD; ATF-interacting protein binding domain
      pfam16794
      Location:11511251
      fn3_4; Fibronectin-III type domain
      cl25732
      Location:324595
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:6581149
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:201443
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      cl28033
      Location:110275
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    7. XM_009247498.2XP_009245773.2  activating transcription factor 7-interacting protein 1 isoform X6

      Conserved Domains (5) summary
      pfam16788
      Location:572782
      ATF7IP_BD; ATF-interacting protein binding domain
      cl25732
      Location:324612
      SMC_N; RecF/RecN/SMC N terminal domain
      cl26464
      Location:6741087
      Atrophin-1; Atrophin-1 family
      cl26761
      Location:201443
      MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
      cl28033
      Location:110275
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
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