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    ABCB4 ATP binding cassette subfamily B member 4 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100398854, updated on 23-Dec-2017

    Summary

    Gene symbol
    ABCB4
    Gene description
    ATP binding cassette subfamily B member 4
    See related
    Ensembl:ENSCJAG00000014623
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix

    Genomic context

    See ABCB4 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    104 current Callithrix jacchus-3.2 (GCF_000004665.1) 8 NC_013903.1 (60331707..60400282)

    Chromosome 8 - NC_013903.1Genomic Context describing neighboring genes Neighboring gene actin, cytoplasmic 2-like Neighboring gene RUN domain containing 3B Neighboring gene ATP binding cassette subfamily B member 1 Neighboring gene uncharacterized LOC103794864 Neighboring gene ubiquitin-conjugating enzyme E2 variant 1 pseudogene Neighboring gene carnitine O-octanoyltransferase

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_013903.1 Chromosome 8 Reference Callithrix jacchus-3.2

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • ABC transporters, organism-specific biosystem (from KEGG)
      ABC transporters, organism-specific biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • ABC transporters, conserved biosystem (from KEGG)
      ABC transporters, conserved biosystemThe ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of ...
    • Bile secretion, organism-specific biosystem (from KEGG)
      Bile secretion, organism-specific biosystemBile is a vital secretion, essential for digestion and absorption of fats and fat-soluble vitamins in the small intestine. Moreover, bile is an important route of elimination for excess cholesterol a...
    • Bile secretion, conserved biosystem (from KEGG)
      Bile secretion, conserved biosystemBile is a vital secretion, essential for digestion and absorption of fats and fat-soluble vitamins in the small intestine. Moreover, bile is an important route of elimination for excess cholesterol a...

    General protein information

    Preferred Names
    phosphatidylcholine translocator ABCB4
    Names
    multidrug resistance protein 3

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Callithrix jacchus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Callithrix jacchus-3.2

    Genomic

    1. NC_013903.1 Reference Callithrix jacchus-3.2

      Range
      60331707..60400282
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003733599.2XP_003733647.1  phosphatidylcholine translocator ABCB4 isoform X1

      Related
      ENSCJAP00000027017.2, ENSCJAT00000028562.2
      Conserved Domains (3) summary
      cd03249
      Location:395631
      ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
      PTZ00265
      Location:161266
      PTZ00265; multidrug resistance protein (mdr1); Provisional
      pfam00664
      Location:61345
      ABC_membrane; ABC transporter transmembrane region
    2. XM_002751637.2XP_002751683.1  phosphatidylcholine translocator ABCB4 isoform X3

      Conserved Domains (3) summary
      cd03249
      Location:395631
      ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
      PTZ00265
      Location:161219
      PTZ00265; multidrug resistance protein (mdr1); Provisional
      pfam00664
      Location:61345
      ABC_membrane; ABC transporter transmembrane region
    3. XM_009002538.1XP_009000786.1  phosphatidylcholine translocator ABCB4 isoform X2

      Conserved Domains (3) summary
      cd03249
      Location:395631
      ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
      PTZ00265
      Location:161238
      PTZ00265; multidrug resistance protein (mdr1); Provisional
      pfam00664
      Location:61345
      ABC_membrane; ABC transporter transmembrane region
    4. XM_009002539.2XP_009000787.1  phosphatidylcholine translocator ABCB4 isoform X5

      Conserved Domains (5) summary
      cd03249
      Location:175411
      ABC_MTABC3_MDL1_MDL2; ATP-binding cassette domain of a mitochondrial protein MTABC3 and related proteins
      COG1126
      Location:174397
      GlnQ; ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
      COG1132
      Location:4891055
      MdlB; ABC-type multidrug transport system, ATPase and permease component [Defense mechanisms]
      pfam00664
      Location:495765
      ABC_membrane; ABC transporter transmembrane region
      cl00549
      Location:1125
      ABC_membrane; ABC transporter transmembrane region
    5. XM_017975388.1XP_017830877.1  phosphatidylcholine translocator ABCB4 isoform X4

    6. XM_017975389.1XP_017830878.1  phosphatidylcholine translocator ABCB4 isoform X6

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