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    CAPN10 calpain 10 [ Callithrix jacchus (white-tufted-ear marmoset) ]

    Gene ID: 100389664, updated on 14-Jul-2017

    Summary

    Gene symbol
    CAPN10
    Gene description
    calpain 10
    See related
    Ensembl:ENSCJAG00000006565
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Callithrix jacchus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
    Orthologs

    Genomic context

    See CAPN10 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current Callithrix jacchus-3.2 (GCF_000004665.1) 6 NC_013901.1 (157111223..157123956)

    Chromosome 6 - NC_013901.1Genomic Context describing neighboring genes Neighboring gene arginyl aminopeptidase like 1 Neighboring gene uncharacterized LOC103794040 Neighboring gene G protein-coupled receptor 35 Neighboring gene aquaporin 12B

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_013901.1 Chromosome 6 Reference Callithrix jacchus-3.2

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Callithrix jacchus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Callithrix jacchus-3.2

    Genomic

    1. NC_013901.1 Reference Callithrix jacchus-3.2

      Range
      157111223..157123956
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017973868.1XP_017829357.1  calpain-10 isoform X8

      Related
      ENSCJAP00000012138.2, ENSCJAT00000012800.2
    2. XM_008999796.2XP_008998044.1  calpain-10 isoform X2

      Related
      ENSCJAP00000012141.2, ENSCJAT00000012804.2
      Conserved Domains (2) summary
      cd00044
      Location:2319
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
      cd00214
      Location:335496
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
    3. XM_008999799.2XP_008998047.1  calpain-10 isoform X4

      Conserved Domains (2) summary
      cd00044
      Location:2319
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
      cd00214
      Location:335495
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
    4. XM_008999798.2XP_008998046.1  calpain-10 isoform X3

      Conserved Domains (3) summary
      cd00044
      Location:2319
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
      cd00214
      Location:335496
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
      cl00165
      Location:512583
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
    5. XM_017973867.1XP_017829356.1  calpain-10 isoform X7

      Related
      ENSCJAP00000012136.2, ENSCJAT00000012798.2
    6. XM_017973866.1XP_017829355.1  calpain-10 isoform X5

      Conserved Domains (2) summary
      cd00044
      Location:2319
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
      cd00214
      Location:335495
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...
    7. XM_017973864.1XP_017829353.1  calpain-10 isoform X1

    8. XM_008999801.2XP_008998049.1  calpain-10 isoform X6

      Conserved Domains (2) summary
      cd00044
      Location:2319
      CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
      cd00214
      Location:335495
      Calpain_III; Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are ...

    RNA

    1. XR_001912430.1 RNA Sequence

      Related
      ENSCJAT00000056824.1
    2. XR_621290.2 RNA Sequence

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