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    myo1c myosin IC [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100380193, updated on 20-Jun-2018

    Summary

    Symbol
    myo1cprovided by Xenbase
    Full Name
    myosin ICprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-1009886
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    nm1; mmib; myr2; myo1c-a; myo1c-b
    Orthologs

    Genomic context

    See myo1c in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (39558154..39651494, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668233.1 (21486552..21579907)

    Chromosome 2 - NC_030678.1Genomic Context describing neighboring genes Neighboring gene v-crk avian sarcoma virus CT10 oncogene homolog Neighboring gene uncharacterized LOC100485552 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon Neighboring gene uncharacterized LOC108645762 Neighboring gene inositol polyphosphate-5-phosphatase K Neighboring gene phosphatidylinositol transfer protein alpha

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    unconventional myosin-Ic
    Names
    nuclear myosin 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030678.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      39558154..39651494 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004911641.3XP_004911698.1  unconventional myosin-Ic isoform X2

      Conserved Domains (3) summary
      smart00242
      Location:8696
      MYSc; Myosin. Large ATPases
      cd01378
      Location:27683
      MYSc_Myo1; class I myosin, motor domain
      pfam06017
      Location:8391006
      Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding
    2. XM_002942143.4XP_002942189.2  unconventional myosin-Ic isoform X1

      Conserved Domains (3) summary
      smart00242
      Location:24712
      MYSc; Myosin. Large ATPases
      cd01378
      Location:43699
      MYSc_Myo1; class I myosin, motor domain
      pfam06017
      Location:8551022
      Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding
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