Format

Send to:

Choose Destination
    • Showing Current items.

    TICAM1 toll like receptor adaptor molecule 1 [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100231928, updated on 15-Feb-2018

    Summary

    Gene symbol
    TICAM1
    Gene description
    toll like receptor adaptor molecule 1
    See related
    Ensembl:ENSTGUG00000000795
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
    Orthologs

    Genomic context

    See TICAM1 in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Taeniopygia_guttata-3.2.4 (GCF_000151805.1) 28 NC_011492.1 (3824923..3826989)

    Chromosome 28 - NC_011492.1Genomic Context describing neighboring genes Neighboring gene ubiquitin like with PHD and ring finger domains 1 Neighboring gene perilipin-3 Neighboring gene fem-1 homolog A Neighboring gene microRNA mir-7-4

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_011492.1 Chromosome 28 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Herpes simplex infection, organism-specific biosystem (from KEGG)
      Herpes simplex infection, organism-specific biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...
    • Herpes simplex infection, conserved biosystem (from KEGG)
      Herpes simplex infection, conserved biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...
    • Influenza A, organism-specific biosystem (from KEGG)
      Influenza A, organism-specific biosystemInfluenza is a contagious respiratory disease caused by influenza virus infection. Influenza A virus is responsible for both annual seasonal epidemics and periodic worldwide pandemics. Novel strains ...
    • Influenza A, conserved biosystem (from KEGG)
      Influenza A, conserved biosystemInfluenza is a contagious respiratory disease caused by influenza virus infection. Influenza A virus is responsible for both annual seasonal epidemics and periodic worldwide pandemics. Novel strains ...
    • NOD-like receptor signaling pathway, organism-specific biosystem (from KEGG)
      NOD-like receptor signaling pathway, organism-specific biosystemSpecific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains mo...
    • NOD-like receptor signaling pathway, conserved biosystem (from KEGG)
      NOD-like receptor signaling pathway, conserved biosystemSpecific families of pattern recognition receptors are responsible for detecting various pathogens and generating innate immune responses. The intracellular NOD-like receptor (NLR) family contains mo...
    • Toll-like receptor signaling pathway, organism-specific biosystem (from KEGG)
      Toll-like receptor signaling pathway, organism-specific biosystemSpecific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors id...
    • Toll-like receptor signaling pathway, conserved biosystem (from KEGG)
      Toll-like receptor signaling pathway, conserved biosystemSpecific families of pattern recognition receptors are responsible for detecting microbial pathogens and generating innate immune responses. Toll-like receptors (TLRs) are membrane-bound receptors id...

    General protein information

    Preferred Names
    TIR domain-containing adapter molecule 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Taeniopygia_guttata-3.2.4 Primary Assembly

    Genomic

    1. NC_011492.1 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

      Range
      3824923..3826989
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002194256.1XP_002194292.1  TIR domain-containing adapter molecule 1

      Related
      ENSTGUP00000000811, ENSTGUT00000000822
      Conserved Domains (2) summary
      pfam12721
      Location:648670
      RHIM; RIP homotypic interaction motif
      cl23749
      Location:425565
      TIR_2; TIR domain
    Support Center