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    HABP2 hyaluronan binding protein 2 [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100223786, updated on 15-Feb-2018

    Summary

    Gene symbol
    HABP2
    Gene description
    hyaluronan binding protein 2
    See related
    Ensembl:ENSTGUG00000010815
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
    Orthologs

    Genomic context

    See HABP2 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Taeniopygia_guttata-3.2.4 (GCF_000151805.1) 6 NC_011470.1 (27398992..27411766)

    Chromosome 6 - NC_011470.1Genomic Context describing neighboring genes Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene transcription factor 7 like 2 Neighboring gene nebulin related anchoring protein Neighboring gene caspase 7

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_011470.1 Chromosome 6 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General protein information

    Preferred Names
    hyaluronan-binding protein 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Taeniopygia_guttata-3.2.4 Primary Assembly

    Genomic

    1. NC_011470.1 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

      Range
      27398992..27411766
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012574580.1XP_012430034.1  hyaluronan-binding protein 2

      Conserved Domains (4) summary
      smart00020
      Location:276512
      Tryp_SPc; Trypsin-like serine protease
      cd00054
      Location:4781
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00108
      Location:165248
      KR; Kringle domain; Kringle domains are believed to play a role in binding mediators, such as peptides, other proteins, membranes, or phospholipids. They are autonomous structural domains, found in a varying number of copies, in blood clotting and ...
      cd00190
      Location:277513
      Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
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