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    COLEC10 collectin subfamily member 10 [ Taeniopygia guttata (zebra finch) ]

    Gene ID: 100222105, updated on 15-Feb-2018

    Summary

    Gene symbol
    COLEC10
    Gene description
    collectin subfamily member 10
    See related
    Ensembl:ENSTGUG00000012342
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Taeniopygia guttata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
    Orthologs

    Genomic context

    See COLEC10 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Taeniopygia_guttata-3.2.4 (GCF_000151805.1) 2 NC_011465.1 (142942329..142972503)

    Chromosome 2 - NC_011465.1Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing 12 Neighboring gene TNF receptor superfamily member 11b Neighboring gene mal, T cell differentiation protein 2 Neighboring gene cellular communication network factor 3

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_011465.1 Chromosome 2 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Taeniopygia_guttata-3.2.4 Primary Assembly

    Genomic

    1. NC_011465.1 Reference Taeniopygia_guttata-3.2.4 Primary Assembly

      Range
      142942329..142972503
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002200430.2XP_002200466.1  collectin-10

      UniProtKB/TrEMBL
      H0ZQ23
      Related
      ENSTGUP00000012708, ENSTGUT00000012851
      Conserved Domains (2) summary
      cd03591
      Location:157272
      CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
      pfam01391
      Location:4586
      Collagen; Collagen triple helix repeat (20 copies)
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