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    aldh5a1 aldehyde dehydrogenase 5 family member A1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100216127, updated on 20-Jun-2018

    Summary

    Symbol
    aldh5a1provided by Xenbase
    Full Name
    aldehyde dehydrogenase 5 family member A1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-1013005
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See aldh5a1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (31482857..31493343)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668704.1 (21525..31976)

    Chromosome 6 - NC_030682.1Genomic Context describing neighboring genes Neighboring gene doublecortin domain containing 2 Neighboring gene magnesium transporter MRS2 Neighboring gene uncharacterized LOC100492839 Neighboring gene secernin 1

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    succinate-semialdehyde dehydrogenase, mitochondrial
    NP_001135578.1
    XP_017950058.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001142106.1NP_001135578.1  succinate-semialdehyde dehydrogenase, mitochondrial

      See identical proteins and their annotated locations for NP_001135578.1

      Status: PROVISIONAL

      Source sequence(s)
      BC168085
      UniProtKB/TrEMBL
      B4F708
      Conserved Domains (1) summary
      cd07103
      Location:31485
      ALDH_F5_SSADH_GabD; Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030682.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      31482857..31493343
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018094569.1XP_017950058.1  succinate-semialdehyde dehydrogenase, mitochondrial isoform X1

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