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    ppa5 Tartrate-resistant acid phosphatase type 5 [ Salmo salar (Atlantic salmon) ]

    Gene ID: 100196389, updated on 12-Mar-2017

    Summary

    Gene symbol
    ppa5
    Gene description
    Tartrate-resistant acid phosphatase type 5
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Salmo salar
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo

    Genomic context

    See ppa5 in Genome Data Viewer
    Location:
    chromosome: ssa12
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current ICSASG_v2 (GCF_000233375.1) ssa12 NC_027311.1 (14590117..14594982, complement)

    Chromosome ssa12 - NC_027311.1Genomic Context describing neighboring genes Neighboring gene hematopoietic lineage cell-specific protein-like Neighboring gene zinc finger protein 120-like Neighboring gene interleukin enhancer-binding factor 3-like Neighboring gene GATA zinc finger domain-containing protein 10-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_027311.1 Chromosome ssa12 Reference ICSASG_v2 Primary Assembly

    Pathways from BioSystems

    General protein information

    Preferred Names
    Tartrate-resistant acid phosphatase type 5; tartrate-resistant acid phosphatase type 5

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001141418.1NP_001134890.1  Tartrate-resistant acid phosphatase type 5 precursor

      See identical proteins and their annotated locations for NP_001134890.1

      Status: PROVISIONAL

      Source sequence(s)
      BT049522
      UniProtKB/TrEMBL
      B5XEQ3
      Conserved Domains (2) summary
      cd07378
      Location:36319
      MPP_ACP5; Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain
      pfam00149
      Location:36251
      Metallophos; Calcineurin-like phosphoesterase

    RefSeqs of Annotated Genomes: Salmo salar Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ICSASG_v2 Primary Assembly

    Genomic

    1. NC_027311.1 Reference ICSASG_v2 Primary Assembly

      Range
      14590117..14594982 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014130653.1XP_013986128.1  tartrate-resistant acid phosphatase type 5 isoform X1

      UniProtKB/TrEMBL
      B5XEQ3
      Conserved Domains (2) summary
      cd07378
      Location:36319
      MPP_ACP5; Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain
      pfam00149
      Location:36251
      Metallophos; Calcineurin-like phosphoesterase
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