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    IRF8 interferon regulatory factor 8 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100173775, updated on 7-Oct-2018

    Summary

    Gene symbol
    IRF8
    Gene description
    interferon regulatory factor 8
    Locus tag
    CR201_G0036772
    See related
    Ensembl:ENSPPYG00000007620
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs

    Genomic context

    See IRF8 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    103 current Susie_PABv2 (GCF_002880775.1) 16 NC_036919.1 (63907773..63931586)
    102 previous assembly P_pygmaeus_2.0.2 (GCF_000001545.4) 16 NC_012607.1 (73639982..73663663)

    Chromosome 16 - NC_036919.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L10a pseudogene Neighboring gene ER membrane protein complex subunit 8 Neighboring gene cytochrome c oxidase subunit IV isoform 1 Neighboring gene uncharacterized LOC103892723 Neighboring gene uncharacterized LOC100939193

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Pertussis, organism-specific biosystem (from KEGG)
      Pertussis, organism-specific biosystemPertussis, also known as whooping cough, is an acute respiratory infectious disease caused by a bacteria called Bordetella Pertussis. The characteristic symptoms are paroxysmal cough, inspiratory whe...
    • Pertussis, conserved biosystem (from KEGG)
      Pertussis, conserved biosystemPertussis, also known as whooping cough, is an acute respiratory infectious disease caused by a bacteria called Bordetella Pertussis. The characteristic symptoms are paroxysmal cough, inspiratory whe...

    General gene information

    Markers

    Homology

    Clone Names

    • DKFZp469B0320

    General protein information

    Preferred Names
    interferon regulatory factor 8

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001133299.1NP_001126771.1  interferon regulatory factor 8

      See identical proteins and their annotated locations for NP_001126771.1

      Status: PROVISIONAL

      Source sequence(s)
      CR860894
      UniProtKB/TrEMBL
      Q5R5G6
      Related
      ENSPPYP00000008597, ENSPPYT00000008945
      Conserved Domains (2) summary
      pfam00605
      Location:9113
      IRF; Interferon regulatory factor transcription factor
      pfam10401
      Location:203381
      IRF-3; Interferon-regulatory factor 3

    RefSeqs of Annotated Genomes: Pongo abelii Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Susie_PABv2 Primary Assembly

    Genomic

    1. NC_036919.1 Reference Susie_PABv2 Primary Assembly

      Range
      63907773..63931586
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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