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    MUC4 mucin 4, cell surface associated [ Sus scrofa (pig) ]

    Gene ID: 100157344, updated on 2-Oct-2018

    Summary

    Gene symbol
    MUC4
    Gene description
    mucin 4, cell surface associated
    See related
    Ensembl:ENSSSCG00000011850
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Expression
    Biased expression in kidney (RPKM 3.9), ovary (RPKM 2.7) and 3 other tissues See more
    Orthologs

    Genomic context

    See MUC4 in Genome Data Viewer
    Location:
    13; 13q41
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 13 NC_010455.5 (134192412..134248435)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 13 NC_010455.4 (143786443..143842402)

    Chromosome 13 - NC_010455.5Genomic Context describing neighboring genes Neighboring gene tyrosine kinase non receptor 2 Neighboring gene uncharacterized LOC100155748 Neighboring gene 14-3-3 protein gamma-like Neighboring gene mucin 20, cell surface associated Neighboring gene 60S ribosomal protein L7 pseudogene

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General protein information

    Preferred Names
    mucin-4
    Names
    cell surface-associated protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206344.2NP_001193273.2  mucin-4 precursor

      Status: PROVISIONAL

      Source sequence(s)
      AEMK02000089
      Related
      ENSSSCP00000012621.3, ENSSSCT00000012962.3
      Conserved Domains (3) summary
      smart00216
      Location:394574
      VWD; von Willebrand factor (vWF) type D domain
      smart00539
      Location:119274
      NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
      cl02758
      Location:275389
      AMOP; AMOP domain

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010455.5 Reference Sscrofa11.1 Primary Assembly

      Range
      134192412..134248435
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021068272.1XP_020923931.1  mucin-4 isoform X1

      Conserved Domains (2) summary
      cl26386
      Location:146341
      DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III
      cl28033
      Location:298701
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    2. XM_021068273.1XP_020923932.1  mucin-4 isoform X2

      Related
      ENSSSCP00000051590.1, ENSSSCT00000062547.1
      Conserved Domains (4) summary
      smart00216
      Location:477657
      VWD; von Willebrand factor (vWF) type D domain
      smart00539
      Location:202357
      NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
      cl02758
      Location:358472
      AMOP; AMOP domain
      cl25495
      Location:30115
      Endomucin
    3. XM_021068274.1XP_020923933.1  mucin-4 isoform X3

      Conserved Domains (3) summary
      smart00216
      Location:449629
      VWD; von Willebrand factor (vWF) type D domain
      smart00539
      Location:174329
      NIDO; Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins
      cl02758
      Location:330444
      AMOP; AMOP domain
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