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    LBX1 ladybird homeobox 1 [ Sus scrofa (pig) ]

    Gene ID: 100155030, updated on 2-Oct-2018

    Summary

    Gene symbol
    LBX1
    Gene description
    ladybird homeobox 1
    See related
    Ensembl:ENSSSCG00000022693
    Gene type
    protein coding
    RefSeq status
    INFERRED
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Expression
    Biased expression in psoas major muscle (RPKM 5.3), longissimus dorsi muscle (RPKM 2.4) and 3 other tissues See more
    Orthologs

    Genomic context

    See LBX1 in Genome Data Viewer
    Location:
    14; 14
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 14 NC_010456.5 (112283479..112287631, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 14 NC_010456.4 (122026824..122030953, complement)

    Chromosome 14 - NC_010456.5Genomic Context describing neighboring genes Neighboring gene Kazal type serine peptidase inhibitor domain 1 Neighboring gene uncharacterized LOC110256711 Neighboring gene uncharacterized LOC110256659 Neighboring gene T cell leukemia homeobox 1 Neighboring gene uncharacterized LOC102161206 Neighboring gene beta-transducin repeat containing E3 ubiquitin protein ligase

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206336.1NP_001193265.1  transcription factor LBX1

      See identical proteins and their annotated locations for NP_001193265.1

      Status: INFERRED

      Source sequence(s)
      AEMK02000096
      UniProtKB/TrEMBL
      D7R811
      Related
      ENSSSCP00000040350.1, ENSSSCT00000066339.1
      Conserved Domains (1) summary
      pfam00046
      Location:128181
      Homeobox; Homeobox domain

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010456.5 Reference Sscrofa11.1 Primary Assembly

      Range
      112283479..112287631 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013983672.2XP_013839126.1  transcription factor LBX1 isoform X1

      UniProtKB/TrEMBL
      D7R811
      Related
      ENSSSCP00000022105.1, ENSSSCT00000031910.2
      Conserved Domains (1) summary
      pfam00046
      Location:128181
      Homeobox; Homeobox domain
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