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    ASIP agouti signaling protein [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100144328, updated on 3-Apr-2017

    Summary

    Gene symbol
    ASIP
    Gene description
    agouti signaling protein
    See related
    Ensembl:ENSOCUG00000011138
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs

    Genomic context

    See ASIP in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current OryCun2.0 (GCF_000003625.3) 4 NC_013672.1 (5435027..5554164, complement)

    Chromosome 4 - NC_013672.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103348190 Neighboring gene adenosylhomocysteinase Neighboring gene eukaryotic translation initiation factor 2 subunit beta Neighboring gene RALY heterogeneous nuclear ribonucleoprotein

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_013672.1 Chromosome 4 Reference OryCun2.0 Primary Assembly

    Pathways from BioSystems

    • Melanogenesis, organism-specific biosystem (from KEGG)
      Melanogenesis, organism-specific biosystemCutaneous melanin pigment plays a critical role in camouflage, mimicry, social communication, and protection against harmful effects of solar radiation. Melanogenesis is under complex regulatory cont...
    • Melanogenesis, conserved biosystem (from KEGG)
      Melanogenesis, conserved biosystemCutaneous melanin pigment plays a critical role in camouflage, mimicry, social communication, and protection against harmful effects of solar radiation. Melanogenesis is under complex regulatory cont...

    General protein information

    Preferred Names
    agouti-signaling protein
    Names
    agouti signaling protein, nonagouti homolog
    agouti signaling protein, transcript 1A
    agouti signaling protein, transcript 1dv
    agouti signaling protein, transcript 2-long

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001122939.1NP_001116411.1  agouti-signaling protein precursor

      See identical proteins and their annotated locations for NP_001116411.1

      Status: PROVISIONAL

      Source sequence(s)
      AM748787
      UniProtKB/TrEMBL
      B0B577
      Related
      ENSOCUP00000009585.2, ENSOCUT00000011137.2
      Conserved Domains (1) summary
      smart00792
      Location:6129
      Agouti; Agouti protein

    RefSeqs of Annotated Genomes: Oryctolagus cuniculus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference OryCun2.0 Primary Assembly

    Genomic

    1. NC_013672.1 Reference OryCun2.0 Primary Assembly

      Range
      5435027..5554164 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017341620.1XP_017197109.1  agouti-signaling protein isoform X1

      UniProtKB/TrEMBL
      B0B577
      Conserved Domains (1) summary
      smart00792
      Location:6129
      Agouti; Agouti protein
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