Format

Send to:

Choose Destination
    • Showing Current items.

    tnfrsf1a.S TNF receptor superfamily member 1A S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 100137626, updated on 8-Apr-2017

    Summary

    Symbol
    tnfrsf1a.S
    Full Name
    TNF receptor superfamily member 1A S homeolog
    Primary source
    Xenbase:XB-GENE-1194114
    Locus tag
    XELAEV_18036733mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    fpf; p55; tbp1; p55-r; tnf-r; tnfar; tnfr1; cd120a; tnfr55; tnfr60; xtnfr1; tnfrsf1a

    Genomic context

    See tnfrsf1a.S in Genome Data Viewer
    Location:
    chromosome: 7S
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 7S NC_030737.1 (5119039..5145129)

    Chromosome 7S - NC_030737.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor receptor superfamily member 3-like Neighboring gene sodium channel, non voltage gated 1 alpha subunit S homeolog Neighboring gene olfactory receptor 8H1-like Neighboring gene olfactory receptor 8H1-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030737.1 Chromosome 7S Reference Xenopus_laevis_v2 Primary Assembly

    Pathways from BioSystems

    • Adipocytokine signaling pathway, organism-specific biosystem (from KEGG)
      Adipocytokine signaling pathway, organism-specific biosystemIncreased adipocyte volume and number are positively correlated with leptin production, and negatively correlated with production of adiponectin. Leptin is an important regulator of energy intake and...
    • Adipocytokine signaling pathway, conserved biosystem (from KEGG)
      Adipocytokine signaling pathway, conserved biosystemIncreased adipocyte volume and number are positively correlated with leptin production, and negatively correlated with production of adiponectin. Leptin is an important regulator of energy intake and...
    • Apoptosis, organism-specific biosystem (from KEGG)
      Apoptosis, organism-specific biosystemApoptosis is a genetically programmed process for the elimination of damaged or redundant cells by activation of caspases (aspartate-specific cysteine proteases). The onset of apoptosis is controlled...
    • Apoptosis, conserved biosystem (from KEGG)
      Apoptosis, conserved biosystemApoptosis is a genetically programmed process for the elimination of damaged or redundant cells by activation of caspases (aspartate-specific cysteine proteases). The onset of apoptosis is controlled...
    • Cytokine-cytokine receptor interaction, organism-specific biosystem (from KEGG)
      Cytokine-cytokine receptor interaction, organism-specific biosystemCytokines are soluble extracellular proteins or glycoproteins that are crucial intercellular regulators and mobilizers of cells engaged in innate as well as adaptive inflammatory host defenses, cell ...
    • Cytokine-cytokine receptor interaction, conserved biosystem (from KEGG)
      Cytokine-cytokine receptor interaction, conserved biosystemCytokines are soluble extracellular proteins or glycoproteins that are crucial intercellular regulators and mobilizers of cells engaged in innate as well as adaptive inflammatory host defenses, cell ...
    • Herpes simplex infection, organism-specific biosystem (from KEGG)
      Herpes simplex infection, organism-specific biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...
    • Herpes simplex infection, conserved biosystem (from KEGG)
      Herpes simplex infection, conserved biosystemHerpes simplex virus (HSV) infections are very common worldwide, with the prevalence of HSV-1 reaching up to 80%-90%. Primary infection with HSV takes place in the mucosa, followed by the establishme...
    • MAPK signaling pathway, organism-specific biosystem (from KEGG)
      MAPK signaling pathway, organism-specific biosystemThe mitogen-activated protein kinase (MAPK) cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. Mammals e...
    • MAPK signaling pathway, conserved biosystem (from KEGG)
      MAPK signaling pathway, conserved biosystemThe mitogen-activated protein kinase (MAPK) cascade is a highly conserved module that is involved in various cellular functions, including cell proliferation, differentiation and migration. Mammals e...
    • mTOR signaling pathway, organism-specific biosystem (from KEGG)
      mTOR signaling pathway, organism-specific biosystemThe mammalian (mechanistic) target of rapamycin (mTOR) is a highly conserved serine/threonine protein kinase, which exists in two complexes termed mTOR complex 1 (mTORC1) and 2 (mTORC2). mTORC1 conta...
    • mTOR signaling pathway, conserved biosystem (from KEGG)
      mTOR signaling pathway, conserved biosystemThe mammalian (mechanistic) target of rapamycin (mTOR) is a highly conserved serine/threonine protein kinase, which exists in two complexes termed mTOR complex 1 (mTORC1) and 2 (mTORC2). mTORC1 conta...

    General protein information

    Preferred Names
    TNF receptor superfamily member 1A S homeolog
    Names
    tumor necrosis factor receptor 1
    tumor necrosis factor receptor superfamily member 1A S homeolog
    tumor necrosis factor receptor superfamily, member 1A

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001114779.1NP_001108251.1  TNF receptor superfamily member 1A S homeolog precursor

      See identical proteins and their annotated locations for NP_001108251.1

      Status: PROVISIONAL

      Source sequence(s)
      AB298596
      UniProtKB/TrEMBL
      A9CPG4
      Conserved Domains (2) summary
      cd08313
      Location:330409
      Death_TNFR1; Death domain of Tumor Necrosis Factor Receptor 1
      cd10576
      Location:58187
      TNFRSF1A; Tumor necrosis factor receptor superfamily member 1A (TNFRSF1A), also known as TNFR1

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030737.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      5119039..5145129
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center