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    pou1f1 POU class 1 homeobox 1 [ Oncorhynchus mykiss (rainbow trout) ]

    Gene ID: 100136675, updated on 27-Jan-2018

    Summary

    Gene symbol
    pou1f1
    Gene description
    POU class 1 homeobox 1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Oncorhynchus mykiss
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
    Also known as
    pit1
    Orthologs

    Genomic context

    See pou1f1 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Omyk_1.0 (GCF_002163495.1) 22 NC_035098.1 (29266945..29270330, complement)

    Chromosome 22 - NC_035098.1Genomic Context describing neighboring genes Neighboring gene transcription cofactor vestigial-like protein 3 Neighboring gene charged multivesicular body protein 2b-like Neighboring gene 5-hydroxytryptamine receptor 1F Neighboring gene tumor necrosis factor receptor superfamily member EDAR-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_035098.1 Chromosome 22 Reference Omyk_1.0 Primary Assembly

    General protein information

    Preferred Names
    pituitary-specific positive transcription factor 1
    Names
    GHF-1
    POU domain, class 1, transcription factor 1
    Pit-1
    growth hormone factor 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001124646.1NP_001118118.1  pituitary-specific positive transcription factor 1

      See identical proteins and their annotated locations for NP_001118118.1

      Status: PROVISIONAL

      Source sequence(s)
      D16513
      UniProtKB/Swiss-Prot
      Q08478
      Conserved Domains (2) summary
      smart00352
      Location:197266
      POU; Found in Pit-Oct-Unc transcription factors
      pfam00046
      Location:285338
      Homeobox; Homeobox domain

    RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Omyk_1.0 Primary Assembly

    Genomic

    1. NC_035098.1 Reference Omyk_1.0 Primary Assembly

      Range
      29266945..29270330 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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